ATPase 3D structures

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Line 26: Line 26:
*''F1F0 ATPase α, δ subunits''
*''F1F0 ATPase α, δ subunits''
-
**[[2a7u]] – EcF1-ATPase N termini – Escherichia coli - NMR<BR />
+
**[[2a7u]] – EcF1-ATPase N termini – ''Escherichia coli'' - NMR<BR />
Line 47: Line 47:
**[[1jnv]] - EcF1-ATPase <br />
**[[1jnv]] - EcF1-ATPase <br />
**[[2qe7]], [[4xd7]] – BaF1-ATPase <br />
**[[2qe7]], [[4xd7]] – BaF1-ATPase <br />
-
**[[5ik2]], [[5hkk]] – F1-ATPase – Cakdalkalibacillus thermarum<br />
+
**[[5ik2]], [[5hkk]] – F1-ATPase – ''Cakdalkalibacillus thermarum''<br />
**[[6foc]] – MsF-ATPase<br />
**[[6foc]] – MsF-ATPase<br />
-
**[[6q45]] – FnF1-ATPase – Fusobacterium nucleatum<br />
+
**[[6q45]] – FnF1-ATPase – ''Fusobacterium nucleatum''<br />
*''F1F0 ATPase α, β, γ, δ, ε subunits''
*''F1F0 ATPase α, β, γ, δ, ε subunits''
Line 59: Line 59:
**[[3fks]] - yF1-ATPase<br />
**[[3fks]] - yF1-ATPase<br />
**[[3zia]] - yF1-ATPase + inhibitor protein<br />
**[[3zia]] - yF1-ATPase + inhibitor protein<br />
-
**[[6f5d]] - F1-ATPase + ribonucleoprotein P18 – Trypanosoma brucei<br />
+
**[[6f5d]] - F1-ATPase + ribonucleoprotein P18 – ''Trypanosoma brucei''<br />
*''F1F0 ATPase multiple subunits''
*''F1F0 ATPase multiple subunits''
Line 74: Line 74:
**[[5i1m]] – yATPase <br />
**[[5i1m]] – yATPase <br />
**[[6hh0]] – yATPase helix 7 - NMR<br />
**[[6hh0]] – yATPase helix 7 - NMR<br />
-
**[[4o1s]] - ATPase subunit A – Thermoplasma volcanium<br />
+
**[[4o1s]] - ATPase subunit A – ''Thermoplasma volcanium''<br />
*''V-ATPase subunit B''
*''V-ATPase subunit B''
Line 176: Line 176:
**[[5lbd]] – AtATPase PAA1 N-domain<br />
**[[5lbd]] – AtATPase PAA1 N-domain<br />
**[[5lbk]] – AtATPase PAA2 N-domain<br />
**[[5lbk]] – AtATPase PAA2 N-domain<br />
-
**[[3voy]], [[3j08]], [[3j09]] - AfATPase – Archaeoglobus fulgidus – CryoEM<br />
+
**[[3voy]], [[3j08]], [[3j09]] - AfATPase – ''Archaeoglobus fulgidus'' – CryoEM<br />
**[[3skx]], [[3sky]] - AfATPase NBD<br />
**[[3skx]], [[3sky]] - AfATPase NBD<br />
**[[3a1c]] – AfATPase NBD + AMPPCP<br />
**[[3a1c]] – AfATPase NBD + AMPPCP<br />
Line 182: Line 182:
**[[3a1e]] - AfATPase NBD (mutant) + AMPPCP<br />
**[[3a1e]] - AfATPase NBD (mutant) + AMPPCP<br />
**[[2rml]] - BsATPase N-terminal – ''Bacillus subtilis'' – NMR<br />
**[[2rml]] - BsATPase N-terminal – ''Bacillus subtilis'' – NMR<br />
-
**[[2gcf]] - syATPase N-terminal - Synechocystis – NMR<br />
+
**[[2gcf]] - syATPase N-terminal - ''Synechocystis'' – NMR<br />
**[[4a4j]] - syATPase N-terminal <br />
**[[4a4j]] - syATPase N-terminal <br />
**[[4a48]] - syATPase<br />
**[[4a48]] - syATPase<br />
Line 250: Line 250:
**[[4ycn]], [[4ycm]] - raATPase + macrolide<br />
**[[4ycn]], [[4ycm]] - raATPase + macrolide<br />
**[[4y3u]] - raATPase + phospholamban<br />
**[[4y3u]] - raATPase + phospholamban<br />
-
**[[6zhf]], [[6zhg]] - LmATPase – Listeria monocytogenes<br />
+
**[[6zhf]], [[6zhg]] - LmATPase – ''Listeria monocytogenes''<br />
**[[6zhh]] - LmATPase (mutant) + phosphocholine<br />
**[[6zhh]] - LmATPase (mutant) + phosphocholine<br />
Line 256: Line 256:
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br />
**[[2ofg]], [[2ofh]] - sATPase N-terminal – NMR<br />
-
**[[4umw]], [[4umv]] - ATPase +Mg – Shigella sonni<br />
+
**[[4umw]], [[4umv]] - ATPase +Mg – ''Shigella sonni''<br />
“Cd+2 ATPase''
“Cd+2 ATPase''
-
**[[7qbz]], [[7qc0]] - ATPase – Sulfitobacter<br />
+
**[[7qbz]], [[7qc0]] - ATPase – ''Sulfitobacter''<br />
*''K+ transporting ATPase''
*''K+ transporting ATPase''
Line 294: Line 294:
**[[5ksd]] - AtATPase C terminal truncated<br />
**[[5ksd]] - AtATPase C terminal truncated<br />
**[[1mhs]] - NcATPase – ''Neurospora crassa''<br />
**[[1mhs]] - NcATPase – ''Neurospora crassa''<br />
-
**[[7op1]], [[7op3]], [[7op5]], [[7op8]] – CtATPase – Chaetomium thermophilum - Cryo EM <br />
+
**[[7op1]], [[7op3]], [[7op5]], [[7op8]] – CtATPase – ''Chaetomium thermophilum'' - Cryo EM <br />
*''Na+ transporting ATPase''
*''Na+ transporting ATPase''
Line 335: Line 335:
*''Monosaccharide transporting ATPase''
*''Monosaccharide transporting ATPase''
-
**[[5dte]] – AsATPase – Actinobacillus succinogenes<br />
+
**[[5dte]] – AsATPase – ''Actinobacillus succinogenes''<br />
**[[4zjp]] – AsATPase + ribopyranose<br />
**[[4zjp]] – AsATPase + ribopyranose<br />
Line 373: Line 373:
**[[5kzf]] – MtATPase residues 98-609<br />
**[[5kzf]] – MtATPase residues 98-609<br />
**[[5kwa]] – MtATPase residues 22-529<br />
**[[5kwa]] – MtATPase residues 22-529<br />
-
**[[6kww]] – ATPase subunit HsIU – Staphylococcus aureus<br />
+
**[[6kww]] – ATPase subunit HsIU – ''Staphylococcus aureus''<br />
**[[5txv]] – EcATPase subunit HslU<br />
**[[5txv]] – EcATPase subunit HslU<br />
**[[6pxk]], [[[6pxl]], [[6pxx]] – EcATPase subunit HsIU + ADP<br />
**[[6pxk]], [[[6pxl]], [[6pxx]] – EcATPase subunit HsIU + ADP<br />
**[[5ji3]], [[5ji2]] – EcATPase subunits HslU+HslV<br />
**[[5ji3]], [[5ji2]] – EcATPase subunits HslU+HslV<br />
**[[6pxi]] – EcATPase subunit HsIU+HsIV + ADP<br />
**[[6pxi]] – EcATPase subunit HsIU+HsIV + ADP<br />
-
**[[2wfw]] – ATPase substrate recognition domain – Rhodococcus erythropolis<br />
+
**[[2wfw]] – ATPase substrate recognition domain – ''Rhodococcus erythropolis''<br />
-
**[[7mhb]] – ATPase subunit HsIU + ADP – Brucella abortus<br />
+
**[[7mhb]] – ATPase subunit HsIU + ADP – ''Brucella abortus''<br />
*Transitional endoplasmic reticulum ATPase residues 1-806
*Transitional endoplasmic reticulum ATPase residues 1-806
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**[[3qc8]], [[3qq8]], [[3qwz]] - hTer-ATPase + FAS-associated factor 1<br />
**[[3qc8]], [[3qq8]], [[3qwz]] - hTer-ATPase + FAS-associated factor 1<br />
**[[3qq7]] - hTer-ATPase<br />
**[[3qq7]] - hTer-ATPase<br />
-
**[[3tiw]] - hTer-ATPase + E3 ubiquitin-protein ligase peptide
+
**[[3tiw]] - hTer-ATPase + E3 ubiquitin-protein ligase peptide<br />
**[[5glf]] - hTer-ATPase + derlin-1 peptide<br />
**[[5glf]] - hTer-ATPase + derlin-1 peptide<br />
**[[5epp]] - hTer-ATPase N + rhomboid-related protein 4 peptide<br />
**[[5epp]] - hTer-ATPase N + rhomboid-related protein 4 peptide<br />
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**[[5x4l]] - hTer-ATPase + UBX domain-containing protein<br />
**[[5x4l]] - hTer-ATPase + UBX domain-containing protein<br />
**[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br />
**[[1s3s]] - mTer-ATPase ND1 domain + P47 C terminal<br />
-
**[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – Drosophila melanogaster<br />
+
**[[4rv0]] - Ter-ATPase N terminal + nuclear protein localization protein – ''Drosophila melanogaster''<br />
* Sarcoplasmic/endoplasmic reticulum ATPase
* Sarcoplasmic/endoplasmic reticulum ATPase
Line 467: Line 467:
* ATPase Invc
* ATPase Invc
-
**[[6sdx]] – ATPase – Salmonella enterica<br />
+
**[[6sdx]] – ATPase – ''Salmonella enterica''<br />
* ATPase in ribosome
* ATPase in ribosome
-
**[[6tmf]] – ATPase – Thermococcus celer<br />
+
**[[6tmf]] – ATPase – ''Thermococcus celer''<br />
* P5A-type ATPase
* P5A-type ATPase
Line 479: Line 479:
* ATPase SpaL/MxiB
* ATPase SpaL/MxiB
-
**[[6n6l]], [[6n6m]], [[6n70]], [[6n71]], [[6n72]], [[6n73]], [[6n75]], [[6n76]] – ATPase (mutant) – Shigella flexneri<br />
+
**[[6n6l]], [[6n6m]], [[6n70]], [[6n71]], [[6n72]], [[6n73]], [[6n75]], [[6n76]] – ATPase (mutant) – ''Shigella flexneri''<br />
* Plasma membrane ATPase
* Plasma membrane ATPase
Line 492: Line 492:
**[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]], [[5x09]] - PhATPS subunit A (mutant)
**[[3mfy]], [[3m4y]], [[3nd8]], [[3nd9]], [[3p20]], [[3qg1]], [[3qia]], [[3qjy]], [[3sdz]], [[3se0]], [[5x09]] - PhATPS subunit A (mutant)
**[[3i72]], [[3i73]], [[3ikj]] - TtATPS subunit A (mutant) <br />
**[[3i72]], [[3i73]], [[3ikj]] - TtATPS subunit A (mutant) <br />
-
**[[5bn5]] – NeATPS + NEQ263 – Nanoarchaeum equitans <br />
+
**[[5bn5]] – NeATPS + NEQ263 – ''Nanoarchaeum equitans'' <br />
**[[5bn4]] – NeATPS + NEQ263 + ANP <br />
**[[5bn4]] – NeATPS + NEQ263 + ANP <br />
**[[5bn3]] – NeATPS + NEQ263 + ADP <br />
**[[5bn3]] – NeATPS + NEQ263 + ADP <br />
Line 511: Line 511:
**[[1ijp]], [[1l6t]] – EcF1-ATPS subunit C (mutant) - NMR<br />
**[[1ijp]], [[1l6t]] – EcF1-ATPS subunit C (mutant) - NMR<br />
**[[4utq]] – EcF1-ATPS membrane domain + insertase YIDC – Cryo EM<BR />
**[[4utq]] – EcF1-ATPS membrane domain + insertase YIDC – Cryo EM<BR />
- 
**[[3lg8]] - MjATPS subunit C C-terminal <br />
**[[3lg8]] - MjATPS subunit C C-terminal <br />
-
**[[2wie]], [[2xqs]], [[2xqt]], [[2xqu]] - ATPS subunit C – Arthrospira platensis<br />
+
**[[2wie]], [[2xqs]], [[2xqt]], [[2xqu]] - ATPS subunit C – ''Arthrospira platensis''<br />
**[[3zk1]], [[3zk2]] - ATPS subunit C <br />
**[[3zk1]], [[3zk2]] - ATPS subunit C <br />
**[[7wem]] – BaF1-ATPS subunit C - NMR<br />
**[[7wem]] – BaF1-ATPS subunit C - NMR<br />
-
**[[4bem]] - F1F0-ATPS – Acetobacterium woodii<br />
+
**[[4bem]] - F1F0-ATPS – ''Acetobacterium woodii''<br />
*V-ATPS subunit E
*V-ATPS subunit E
Line 534: Line 533:
*F1F0 ATPS α subunit
*F1F0 ATPS α subunit
-
**[[2r9v]] - F1-ATPS – Thermotoga maritima<br />
+
**[[2r9v]] - F1-ATPS – ''Thermotoga maritima''<br />
*F1F0 ATPS β subunit
*F1F0 ATPS β subunit
Line 542: Line 541:
**[[1l2p]] – EcF1-ATPS dimerization domain<br />
**[[1l2p]] – EcF1-ATPS dimerization domain<br />
**[[2khk]] - EcF1-ATPS fragment – NMR<br />
**[[2khk]] - EcF1-ATPS fragment – NMR<br />
-
**[[4q4l]] - F1-ATPS – Burkholderia thailandensis<br />
+
**[[4q4l]] - F1-ATPS – ''Burkholderia thailandensis''<br />
*F1F0 ATPS γ subunit
*F1F0 ATPS γ subunit
Line 548: Line 547:
**[[1wu0]] – BaATPS – NMR<br />
**[[1wu0]] – BaATPS – NMR<br />
**[[1a91]], [[1c0v]], [[1aty]], [[1c99]] – EcF1-ATPS – NMR<br />
**[[1a91]], [[1c0v]], [[1aty]], [[1c99]] – EcF1-ATPS – NMR<br />
-
**[[2wgm]] – ItF0-ATPS – Ilyobacter tartaricus<br />
+
**[[2wgm]] – ItF0-ATPS – ''Ilyobacter tartaricus''<br />
-
**[[4v1g]] – MpF0F1-ATPS – Mycobacterium phlei<br />
+
**[[4v1g]] – MpF0F1-ATPS – ''Mycobacterium phlei''<br />
**[[4v1f]], [[4v1h]] – MpF0-ATPS + drug<br />
**[[4v1f]], [[4v1h]] – MpF0-ATPS + drug<br />
**[[2x2v]], [[4cbk]], [[4cbj]] – BpF0-ATPS – ''Bacillus pseudofirmus''<br />
**[[2x2v]], [[4cbk]], [[4cbj]] – BpF0-ATPS – ''Bacillus pseudofirmus''<br />
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**[[2e5y]] – BaF1-ATPS<br />
**[[2e5y]] – BaF1-ATPS<br />
**[[6pi4]] – MsF1-ATPS <BR />
**[[6pi4]] – MsF1-ATPS <BR />
-
**[[7vil]] – F1-ATPS – Mycobacterium abscessus - NMR<BR />
+
**[[7vil]] – F1-ATPS – ''Mycobacterium abscessus'' - NMR<BR />
**[[5yio]] – MtF1-ATPS+GDP – ''Mycobacterium tuberculosis'' - NMR<br />
**[[5yio]] – MtF1-ATPS+GDP – ''Mycobacterium tuberculosis'' - NMR<br />
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**[[7md3]] – yATPS + ATP + drug – Cryo EM <br />
**[[7md3]] – yATPS + ATP + drug – Cryo EM <br />
**[[2wpd]], [[2wss]] - yF1-ATPS+subunit 9+Mg+ADP+ATP<br />
**[[2wpd]], [[2wss]] - yF1-ATPS+subunit 9+Mg+ADP+ATP<br />
-
**[[6tdu]], [[6tdv]], [[6tdw]], [[6tdx]], [[6tdy]], [[6tdz]], [[6te0]] – ATPS + ADP + ATP – Euglena gracilis – Cryo EM<br />
+
**[[6tdu]], [[6tdv]], [[6tdw]], [[6tdx]], [[6tdy]], [[6tdz]], [[6te0]] – ATPS + ADP + ATP – ''Euglena gracilis'' – Cryo EM<br />
-
**[[5fl7]] – ATPS + ADP + ATP – Yarrowiya lipolytica <br />
+
**[[5fl7]] – ATPS + ADP + ATP – ''Yarrowiya lipolytica'' <br />
**[[7jg5]], [[7jg6]], [[7jg7]], [[7jgb]], [[7jgc]], [[7nk7]], [[7nk9]], [[7nkb]], [[7nkd]], [[7nkh]], [[7nkj]], [[7nkk]], [[7nkl]], [[7nkn]], [[7nkp]], [[7nkq]], [[7nl9]] – MsATPS – Cryo EM<br />
**[[7jg5]], [[7jg6]], [[7jg7]], [[7jgb]], [[7jgc]], [[7nk7]], [[7nk9]], [[7nkb]], [[7nkd]], [[7nkh]], [[7nkj]], [[7nkk]], [[7nkl]], [[7nkn]], [[7nkp]], [[7nkq]], [[7nl9]] – MsATPS – Cryo EM<br />
**[[7jg8]], [[7jg9]], [[7jga]] – MsATPS + drug – Cryo EM<br />
**[[7jg8]], [[7jg9]], [[7jga]] – MsATPS + drug – Cryo EM<br />
**[[7njk]], [[7njl]], [[7njm]], [[7njn]], [[7njo]], [[7njp]], [[7njq]], [[7njr]], [[7njs]], [[7njt]], [[7nju]], [[7njv]], [[7njw]], [[7njx]], [[7njy]] – MsATPS + ADP + ATP – Cryo EM<br />
**[[7njk]], [[7njl]], [[7njm]], [[7njn]], [[7njo]], [[7njp]], [[7njq]], [[7njr]], [[7njs]], [[7njt]], [[7nju]], [[7njv]], [[7njw]], [[7njx]], [[7njy]] – MsATPS + ADP + ATP – Cryo EM<br />
-
**[[6f36]], [[6rd4]], [[6rd5]], [[6rd6]], [[6rd7]], [[6rd8]], [[6rd9]], [[6rda]], [[6rdb]], [[6rdc]], [[6rdd]], [[6rde]], [[6rdf]], [[6rdg]], [[6rdi]], [[6rdj]], [[6rdk]], [[6rdl]], [[6rdm]], [[6rdn]], [[6rdp]], [[6rdq]], [[6rds]], [[6rdt]], [[6rdu]], [[6rdv]], [[6rdx]], [[6rdy]], [[6rdz]], [[6re0]], [[6re1]], [[6re2]], [[6re3]], [[6re4]], [[6re5]], [[6re6]], [[6re7]], [[6re8]], [[6re9]], [[6rea]], [[6reb]], [[6rec]], [[6red]], [[6ree]], [[6ref]], [[6rer]], [[6res]], [[6ret]], [[6reu]] – ATPS – Polytomella - Cryo EM<br />
+
**[[6f36]], [[6rd4]], [[6rd5]], [[6rd6]], [[6rd7]], [[6rd8]], [[6rd9]], [[6rda]], [[6rdb]], [[6rdc]], [[6rdd]], [[6rde]], [[6rdf]], [[6rdg]], [[6rdi]], [[6rdj]], [[6rdk]], [[6rdl]], [[6rdm]], [[6rdn]], [[6rdp]], [[6rdq]], [[6rds]], [[6rdt]], [[6rdu]], [[6rdv]], [[6rdx]], [[6rdy]], [[6rdz]], [[6re0]], [[6re1]], [[6re2]], [[6re3]], [[6re4]], [[6re5]], [[6re6]], [[6re7]], [[6re8]], [[6re9]], [[6rea]], [[6reb]], [[6rec]], [[6red]], [[6ree]], [[6ref]], [[6rer]], [[6res]], [[6ret]], [[6reu]] – ATPS – ''Polytomella'' - Cryo EM<br />
-
**[[5lqz]], [[5lqy]], [[5lqx]] – ATPS + ATPase inhibitor protein – Ogataea angusta - Cryo EM<br />
+
**[[5lqz]], [[5lqy]], [[5lqx]] – ATPS + ATPase inhibitor protein – ''Ogataea angusta'' - Cryo EM<br />
**[[5dn6]] – PdATPS + zeta inhibitor protein <br />
**[[5dn6]] – PdATPS + zeta inhibitor protein <br />
**[[5t4o]], [[5t4p]], [[5t4q]], [[6oqr]], [[6oqs]], [[6oqt]], [[6oqu]], [[6oqv]], [[6oqw]], [[6pqv]], [[6vwk]], [[6wnq]], [[6wnr]] – EcATPS – Cryo EM<br />
**[[5t4o]], [[5t4p]], [[5t4q]], [[6oqr]], [[6oqs]], [[6oqt]], [[6oqu]], [[6oqv]], [[6oqw]], [[6pqv]], [[6vwk]], [[6wnq]], [[6wnr]] – EcATPS – Cryo EM<br />
Line 619: Line 618:
**[[7xko]], [[7xkp]] – BaATPS – Cryo EM<br />
**[[7xko]], [[7xkp]] – BaATPS – Cryo EM<br />
**[[6n2d]], [[6n2y]], [[6n2z]], [[6n30]] – BaATPS + ADP + ATP – Cryo EM<br />
**[[6n2d]], [[6n2y]], [[6n2z]], [[6n30]] – BaATPS + ADP + ATP – Cryo EM<br />
-
**[[7p2y]], [[7p3n]], [[7p3w]] – ATPS + ADP + ATP – Acinetobacter baumannii – Cryo EM<br />
+
**[[7p2y]], [[7p3n]], [[7p3w]] – ATPS + ADP + ATP – ''Acinetobacter baumannii'' – Cryo EM<br />
-
**[[6tmg]], [[6tmh]], [[6tmi]], [[6tmj]], [[6tmk]], [[6tml]] – ATPS + ATPase inhibitor protein + OSCP + ADP + ATP – Toxoplasma gondii - Cryo EM<br />
+
**[[6tmg]], [[6tmh]], [[6tmi]], [[6tmj]], [[6tmk]], [[6tml]] – ATPS + ATPase inhibitor protein + OSCP + ADP + ATP – ''Toxoplasma gondii'' - Cryo EM<br />
-
**[[6ynv]], [[6ynw]], [[6ynx]], [[6yny]], [[6ynz]], [[6yo0]] – ATPS + ADP + ATP – Tetrahymena thermophila - Cryo EM<br />
+
**[[6ynv]], [[6ynw]], [[6ynx]], [[6yny]], [[6ynz]], [[6yo0]] – ATPS + ADP + ATP – ''Tetrahymena thermophila'' - Cryo EM<br />
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 07:05, 26 October 2022

3D Structures of ATPase

ATPase 3D structures

Updated on 26-October-2022 






**3rfu, 4bbj, 4bev, 4byg – LpATPase – Legionella pneumophila



“Zn+2 ATPase

“Cd+2 ATPase 

**2r31, 2p4x – PdATPase ATP12


Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

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