This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ka2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:18, 15 November 2023) (edit) (undo)
 
Line 4: Line 4:
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4ka2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KA2 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4ka2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KA2 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DPR:D-PROLINE'>DPR</scene>, <scene name='pdbligand=MPT:BETA-MERCAPTOPROPIONIC+ACID'>MPT</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=U3X:4-[(CYCLOHEXYLMETHYL)AMINO]-L-PHENYLALANINE'>U3X</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DPR:D-PROLINE'>DPR</scene>, <scene name='pdbligand=MPT:BETA-MERCAPTOPROPIONIC+ACID'>MPT</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene>, <scene name='pdbligand=U3X:4-[(CYCLOHEXYLMETHYL)AMINO]-L-PHENYLALANINE'>U3X</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ka2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ka2 OCA], [https://pdbe.org/4ka2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ka2 RCSB], [https://www.ebi.ac.uk/pdbsum/4ka2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ka2 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ka2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ka2 OCA], [https://pdbe.org/4ka2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ka2 RCSB], [https://www.ebi.ac.uk/pdbsum/4ka2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ka2 ProSAT]</span></td></tr>
</table>
</table>

Current revision

Crystal structure of CD4-mimetic miniprotein M48U12 in complex with HIV-1 YU2 gp120

PDB ID 4ka2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools