8bhx
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==High resolution structure of the iron Superoxide Dismutase from Thermobifida fusca== | |
+ | <StructureSection load='8bhx' size='340' side='right'caption='[[8bhx]], [[Resolution|resolution]] 1.25Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[8bhx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermobifida_fusca Thermobifida fusca]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8BHX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8BHX FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.25Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BO3:BORIC+ACID'>BO3</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8bhx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8bhx OCA], [https://pdbe.org/8bhx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8bhx RCSB], [https://www.ebi.ac.uk/pdbsum/8bhx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8bhx ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q47RC2_THEFY Q47RC2_THEFY] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.[RuleBase:RU000414] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Superoxide dismutases (SODs) are enzymes that catalyze the dismutation of the superoxide radical anion into O(2) and H(2)O(2) in a two-step reaction. They are ubiquitous to all forms of life and four different types of metal centers are detected, dividing this class of enzymes into Cu-/Zn-, Ni-, Mn-, and Fe-SODs. In this study, a superoxide dismutase from the thermophilic bacteria Thermobifida fusca (TfSOD) was cloned and expressed before the recombinant enzyme was characterized. The enzyme was found to be active for superoxide dismutation measured by inhibition of cytochrome c oxidation and the inhibition of the autoxidation of pyrogallol. Its pH-optimum was determined to be 7.5, while it has a broad temperature optimum ranging from 20 to 90 degrees C. Combined with the T(m) that was found to be 78.5 +/- 0.5 degrees C at pH 8.0, TfSOD can be defined as a thermostable enzyme. Moreover, the crystal structure of TfSOD was determined and refined to 1.25 A resolution. With electron paramagnetic resonance spectroscopy, it was confirmed that iron is the metal co-factor of TfSOD. The cell potential (E(m)) for the TfSOD-Fe(3+)/TfSOD-Fe(2+) redox couple was determined to be 287 mV. | ||
- | + | Initial characterization of an iron superoxide dismutase from Thermobifida fusca.,Hamre AG, Al-Sadawi R, Johannesen KM, Bisarro B, Kjendseth AR, Leiros HS, Sorlie M J Biol Inorg Chem. 2023 Oct;28(7):689-698. doi: 10.1007/s00775-023-02019-9. Epub , 2023 Sep 19. PMID:37725277<ref>PMID:37725277</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: | + | <div class="pdbe-citations 8bhx" style="background-color:#fffaf0;"></div> |
- | [[Category: Leiros | + | == References == |
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Thermobifida fusca]] | ||
+ | [[Category: Leiros H-KS]] | ||
+ | [[Category: Sorlie M]] |
Current revision
High resolution structure of the iron Superoxide Dismutase from Thermobifida fusca
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