4l36

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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4l36]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_scabiei_87.22 Streptomyces scabiei 87.22]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L36 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4L36 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4l36]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_scabiei_87.22 Streptomyces scabiei 87.22]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L36 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4L36 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEB:HEME+B/C'>HEB</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.104&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEB:HEME+B/C'>HEB</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4l36 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l36 OCA], [https://pdbe.org/4l36 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4l36 RCSB], [https://www.ebi.ac.uk/pdbsum/4l36 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4l36 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4l36 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l36 OCA], [https://pdbe.org/4l36 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4l36 RCSB], [https://www.ebi.ac.uk/pdbsum/4l36 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4l36 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[https://www.uniprot.org/uniprot/C9ZDC6_STRSW C9ZDC6_STRSW]
[https://www.uniprot.org/uniprot/C9ZDC6_STRSW C9ZDC6_STRSW]
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Thaxtomins, a family of phytotoxins produced by Streptomyces spp., can cause dramatic plant cell hypertrophy and seedling stunting. Thaxtomin A is the dominant form from Streptomyces scabies and has demonstrated herbicidal action. TxtE, a cytochrome P450 enzyme from Streptomyces scabies 87.22, catalyzes direct nitration of the indolyl moiety of L-tryptophan to L-4-nitrotryptophan using nitric oxide, dioxygen and NADPH. The crystal structure of TxtE was determined at 2.1 A resolution and described in this work. A clearly defined substrate access channel is observed and can be classified as channel 2a, which is common in bacteria cytochrome P450 enzymes. A continuous hydrogen bond chain from the active site to the external solvent is observed. Compared with other cytochrome P450 enzymes, TxtE shows a unique proton transfer pathway which crosses the helix I distortion. Polar contacts of Arg59, Tyr89, Asn293, Thr296, and Glu394 with L-tryptophan are seen using molecular docking analysis, which are potentially important for substrate recognition and binding. After mutating Arg59, Asn293, Thr296 or Glu394 to leucine, the substrate binding ability of TxtE was lost or decreased significantly. Based on the docking and mutation results, a possible mechanism for substrate recognition and binding is proposed.
 
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Structural Insights into the Mechanism for Recognizing Substrate of the Cytochrome P450 Enzyme TxtE.,Yu F, Li M, Xu C, Wang Z, Zhou H, Yang M, Chen Y, Tang L, He J PLoS One. 2013 Nov 25;8(11):e81526. doi: 10.1371/journal.pone.0081526. PMID:24282603<ref>PMID:24282603</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 4l36" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>

Current revision

Crystal structure of the cytochrome P450 enzyme TxtE

PDB ID 4l36

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