This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4lfz
From Proteopedia
(Difference between revisions)
| Line 4: | Line 4: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4lfz]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vvx 1vvx], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vvy 1vvy], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vvz 1vvz] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vw0 1vw0]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LFZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LFZ FirstGlance]. <br> | <table><tr><td colspan='2'>[[4lfz]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vvx 1vvx], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vvy 1vvy], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vvz 1vvz] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vw0 1vw0]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LFZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LFZ FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1MG:1N-METHYLGUANOSINE-5-MONOPHOSPHATE'>1MG</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PPU:PUROMYCIN-5-MONOPHOSPHATE'>PPU</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.9200006Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1MG:1N-METHYLGUANOSINE-5-MONOPHOSPHATE'>1MG</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PPU:PUROMYCIN-5-MONOPHOSPHATE'>PPU</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lfz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lfz OCA], [https://pdbe.org/4lfz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lfz RCSB], [https://www.ebi.ac.uk/pdbsum/4lfz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lfz ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lfz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lfz OCA], [https://pdbe.org/4lfz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lfz RCSB], [https://www.ebi.ac.uk/pdbsum/4lfz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lfz ProSAT]</span></td></tr> | ||
</table> | </table> | ||
Current revision
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin
| |||||||||||
