4lhf
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4lhf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_P2 Escherichia virus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LHF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LHF FirstGlance]. <br> | <table><tr><td colspan='2'>[[4lhf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_P2 Escherichia virus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LHF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LHF FirstGlance]. <br> | ||
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lhf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lhf OCA], [https://pdbe.org/4lhf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lhf RCSB], [https://www.ebi.ac.uk/pdbsum/4lhf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lhf ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.401Å</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lhf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lhf OCA], [https://pdbe.org/4lhf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lhf RCSB], [https://www.ebi.ac.uk/pdbsum/4lhf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lhf ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/VCOX_BPP2 VCOX_BPP2] Repressor of the Pc promoter which controls gene C, which codes for the immunity repressor, and int, whose product promotes the site-specific recombination over att. | [https://www.uniprot.org/uniprot/VCOX_BPP2 VCOX_BPP2] Repressor of the Pc promoter which controls gene C, which codes for the immunity repressor, and int, whose product promotes the site-specific recombination over att. | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | The Cox protein from bacteriophage P2 is a small multifunctional DNA-binding protein. It is involved in site-specific recombination leading to P2 prophage excision and functions as a transcriptional repressor of the P2 Pc promoter. Furthermore, it transcriptionally activates the unrelated, defective prophage P4 that depends on phage P2 late gene products for lytic growth. In this article, we have investigated the structural determinants to understand how P2 Cox performs these different functions. We have solved the structure of P2 Cox to 2.4 A resolution. Interestingly, P2 Cox crystallized in a continuous oligomeric spiral with its DNA-binding helix and wing positioned outwards. The extended C-terminal part of P2 Cox is largely responsible for the oligomerization in the structure. The spacing between the repeating DNA-binding elements along the helical P2 Cox filament is consistent with DNA binding along the filament. Functional analyses of alanine mutants in P2 Cox argue for the importance of key residues for protein function. We here present the first structure from the Cox protein family and, together with previous biochemical observations, propose that P2 Cox achieves its various functions by specific binding of DNA while wrapping the DNA around its helical oligomer. | ||
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- | Structural insight into DNA binding and oligomerization of the multifunctional Cox protein of bacteriophage P2.,Berntsson RP, Odegrip R, Sehlen W, Skaar K, Svensson LM, Massad T, Hogbom M, Haggard-Ljungquist E, Stenmark P Nucleic Acids Res. 2014 Feb 1;42(4):2725-35. doi: 10.1093/nar/gkt1119. Epub 2013 , Nov 19. PMID:24259428<ref>PMID:24259428</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 4lhf" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> |
Current revision
Crystal structure of a DNA binding protein from phage P2
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