Elongation factor 3D structures

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**[[1mj1]] – EcEF + Phe-tRNA + S12 + S13 + L11 – Cryo EM<BR />
**[[1mj1]] – EcEF + Phe-tRNA + S12 + S13 + L11 – Cryo EM<BR />
**[[3ep2]] - EcEF + tRNA + S12 + L11 + 16SRRNA + 23SRRNA – Cryo EM<BR />
**[[3ep2]] - EcEF + tRNA + S12 + L11 + 16SRRNA + 23SRRNA – Cryo EM<BR />
 +
**[[8qhc]] - EcEF + tRNA + SidH + E3 ubiquitin protein ligase – Cryo EM<BR />
**[[1ttt]], [[1ob5]] – TaEF + Phe-tRNA + GDPNP - ''Thermus aquaticus''<BR />
**[[1ttt]], [[1ob5]] – TaEF + Phe-tRNA + GDPNP - ''Thermus aquaticus''<BR />
**[[1b23]] - TaEF + Cys-tRNA<BR />
**[[1b23]] - TaEF + Cys-tRNA<BR />
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**[[4j0q]] – PpEF – ''Pseudomonas putida''<br />
**[[4j0q]] – PpEF – ''Pseudomonas putida''<br />
**[[5w75]] – EF – ''Thermotoga neapolitana''<br />
**[[5w75]] – EF – ''Thermotoga neapolitana''<br />
 +
**[[8yly]], [[8ym3]] – EF – ''Synechococcus elongatus''<br />
**[[5tbf]] – EF domain 2-3– ''Vibrio cholerae"
**[[5tbf]] – EF domain 2-3– ''Vibrio cholerae"
**[[5w76]], [[6htw]], [[6i8r]], [[7bbn]] – EF – synthetic<br />
**[[5w76]], [[6htw]], [[6i8r]], [[7bbn]] – EF – synthetic<br />
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**[[4v68]] – TtEF + antibiotic in 70S ribosome – Cryo EM<BR />
**[[4v68]] – TtEF + antibiotic in 70S ribosome – Cryo EM<BR />
**[[2bvn]] - EcEF + GDP<BR />NP + antibiotic<BR />
**[[2bvn]] - EcEF + GDP<BR />NP + antibiotic<BR />
-
**[[1d8t]], [[2hcj]], [[2hdn]], [[3u6b]], [[3u6k]], [[4g5g]], [[5jbq]] – EcEF + antibiotic<br />
+
**[[1d8t]], [[2hcj]], [[2hdn]], [[3u6b]], [[3u6k]], [[4g5g]], [[5jbq]], [[8fr3]] – EcEF + antibiotic<br />
**[[7st7]] – EcEF + antibiotic in 70S ribosome – Cryo EM<BR />
**[[7st7]] – EcEF + antibiotic in 70S ribosome – Cryo EM<BR />
Line 53: Line 55:
**[[3wy9]] – PhEF + L12 <br />
**[[3wy9]] – PhEF + L12 <br />
**[[4p3y]] – EcEF + thiol:disulfide interchange protein <br />
**[[4p3y]] – EcEF + thiol:disulfide interchange protein <br />
 +
**[[8qfs]] – EcEF + SidH + tRNA <br />
**[[5i4r]], [[5i4q]], [[7vmc]] – EcEF + CDIA + CDII <br />
**[[5i4r]], [[5i4q]], [[7vmc]] – EcEF + CDIA + CDII <br />
**[[4zv4]] – PaEF + TSE6 - ''Pseudomonas aeruginosa''<br />
**[[4zv4]] – PaEF + TSE6 - ''Pseudomonas aeruginosa''<br />
**[[4iw3]] – PpEF + prolyl hydroxylase <br />
**[[4iw3]] – PpEF + prolyl hydroxylase <br />
**[[5v7y]] – EF + prolyl hydroxylase – ''Bacillus anthracis''<br />
**[[5v7y]] – EF + prolyl hydroxylase – ''Bacillus anthracis''<br />
 +
**[[8xi2]] – EF in C* complex – ''Chlamydomonas reinhardtii'' – Cryo EM <br />
*''EF-Tu with EF-Ts''
*''EF-Tu with EF-Ts''
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**[[5lzc]], [[5uyk]], [[5uyl]], [[5uym]], [[5uyn]], [[5uyp]], [[5uyq]], [[5wdt]], [[5we4]], [[5we6]], [[5wf0]], [[5wfk]], [[5wfs]] -  EcEF in 70S ribosome – Cryo EM<BR />
**[[5lzc]], [[5uyk]], [[5uyl]], [[5uym]], [[5uyn]], [[5uyp]], [[5uyq]], [[5wdt]], [[5we4]], [[5we6]], [[5wf0]], [[5wfk]], [[5wfs]] -  EcEF in 70S ribosome – Cryo EM<BR />
**[[5imq]], [[5imr]], [[6zmo]] -  EcEF in 70S ribosome + Nsp1– Cryo EM<BR />
**[[5imq]], [[5imr]], [[6zmo]] -  EcEF in 70S ribosome + Nsp1– Cryo EM<BR />
 +
**[[8g7p]], [[8g7q]] - EcEF in 70S ribosome + tRNA – Cryo EM<BR />
**[[1zc8]], [[3dwu]] – TtEF in 70S ribosome – Cryo EM<BR />
**[[1zc8]], [[3dwu]] – TtEF in 70S ribosome – Cryo EM<BR />
**[[7paj]], [[7pak]], [[7pao]], [[7paq]], [[7par]], [[7pha]], [[7pi4]], [[7pi9]], [[7pib]], [[7pip]], [[7pis]], [[7pit]] – MpEF in 70S ribosome – ''Mycoplasma pneumoniae'' - Cryo EM<BR />
**[[7paj]], [[7pak]], [[7pao]], [[7paq]], [[7par]], [[7pha]], [[7pi4]], [[7pi9]], [[7pib]], [[7pip]], [[7pis]], [[7pit]] – MpEF in 70S ribosome – ''Mycoplasma pneumoniae'' - Cryo EM<BR />
**[[4v5g]], [[4v5l]], [[4v5p]], [[4v5q]], [[4v5r]], [[4v5s]] - TtEF in 70S ribosome
**[[4v5g]], [[4v5l]], [[4v5p]], [[4v5q]], [[4v5r]], [[4v5s]] - TtEF in 70S ribosome
 +
**[[8v9l]] – EF in 70S ribosome – ''Mycobacterium smegmatis'' - Cryo EM<BR />
*EF-SII
*EF-SII
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**[[1tfi]] – hEF – human – NMR<BR />
**[[1tfi]] – hEF – human – NMR<BR />
**[[3ndq]] - hEF domain II<BR />
**[[3ndq]] - hEF domain II<BR />
 +
**[[8a40]] – hEF in RNA Pol II complex – Cryo EM <br />
**[[1wjt]] – mEF N terminal – mouse – NMR<BR />
**[[1wjt]] – mEF N terminal – mouse – NMR<BR />
 +
**[[8h6r]] – EF LW domain – ''Arabidopsis thaliana''<br />
**[[1enw]] – yEF domain II – NMR<BR />
**[[1enw]] – yEF domain II – NMR<BR />
**[[1eo0]] - yEF domain I – NMR<BR />
**[[1eo0]] - yEF domain I – NMR<BR />
**[[1pqv]], [[1y1v]] – yEF + RNA polymerase II<BR />
**[[1pqv]], [[1y1v]] – yEF + RNA polymerase II<BR />
**[[1y1y]], [[3gtm]] – yEF + RNA polymerase II + RNA<BR />
**[[1y1y]], [[3gtm]] – yEF + RNA polymerase II + RNA<BR />
 +
**[[8uoq]], [[8uot]] – yEF + RNA polymerase II + RNA – Cryo EM
**[[2xex]] – SaEF – ''Staphylococcus aureus''<BR />
**[[2xex]] – SaEF – ''Staphylococcus aureus''<BR />
-
**[[2m1h]] – EF PWWP domain – ''Trypanosoma brucei'' – NMR<br />
+
**[[2m1h]] – TbEF PWWP domain – ''Trypanosoma brucei'' – NMR<br />
 +
**[[7xgw]] – TbEF LN domain <br />
*EF-ELL2
*EF-ELL2
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**[[4v9d]] – EcEF in 30S ribosome + antibiotics – Cryo-EM<BR />
**[[4v9d]] – EcEF in 30S ribosome + antibiotics – Cryo-EM<BR />
**[[1zn0]], [[2rdo]], [[3j0e]], [[3ja1]], [[4v6t]], [[4v9b]], [[7k51]], [[7k52]], [[7k54]] – EcEF in 30S ribosome – Cryo-EM<BR />
**[[1zn0]], [[2rdo]], [[3j0e]], [[3ja1]], [[4v6t]], [[4v9b]], [[7k51]], [[7k52]], [[7k54]] – EcEF in 30S ribosome – Cryo-EM<BR />
-
**[[3j9z]], [[4v7b]], [[4v7d]], [[7k55]], [[7n2c]], [[7n2v]], [[7pjv]], [[7pjw]], [[7pjx]], [[7pjy]], [[7pjz]], [[7ssd]], [[7ssl]], [[7ssp]], [[7ug7]] – EcEF in 70S ribosome – Cryo-EM<BR />
+
**[[3j9z]], [[4v7b]], [[4v7d]], [[7k55]], [[7n2c]], [[7n2v]], [[7pjv]], [[7pjw]], [[7pjx]], [[7pjy]], [[7pjz]], [[7ssd]], [[7ssl]], [[7ssp]], [[7ug7]], [[9gha]], [[9ghc]], [[9ghd]] – EcEF in 70S ribosome – Cryo-EM<BR />
**[[7otc]] – EcEF in 70S ribosome + antibiotics – Cryo-EM<BR />
**[[7otc]] – EcEF in 70S ribosome + antibiotics – Cryo-EM<BR />
 +
**[[8p2f]], [[8p2g]], [[8p2h]] – SaEF in 70S ribosome – Cryo-EM<BR />
*EF-GreA/GreB
*EF-GreA/GreB
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**[[2kwp]] - EcEF N terminal – NMR<BR />
**[[2kwp]] - EcEF N terminal – NMR<BR />
**[[2jzb]] – EcEF + RNA polymerase subunit α - NMR<BR />
**[[2jzb]] – EcEF + RNA polymerase subunit α - NMR<BR />
 +
**[[9f9u]] - EF – ''Saccharolobus solfataricus''<BR />
 +
**[[9fjl]] – NusA2 – ''Sulfolobus acidocaldarius''<BR />
*EF-P
*EF-P
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**[[6s8z]] – EF – ''Corynebacterium glutamicum'' <br />
**[[6s8z]] – EF – ''Corynebacterium glutamicum'' <br />
**[[5wxk]] – EF + EARP – ''Neisseria meningitidis''<br />
**[[5wxk]] – EF + EARP – ''Neisseria meningitidis''<br />
 +
 +
*EF-P-like
 +
**[[8s8u]] – EcEFL
*EF-Ts
*EF-Ts
Line 187: Line 203:
*EF-1
*EF-1
-
**[[8b6z]] – hEF alpha in 80S ribosome – Cryo EM <br />
+
**[[8b6z]], [[9azs]] – hEF alpha in 80S ribosome – Cryo EM <br />
**[[5dqs]] – hEF β+γ <br />
**[[5dqs]] – hEF β+γ <br />
**[[5jpo]] – hEF γ+δ <br />
**[[5jpo]] – hEF γ+δ <br />

Revision as of 10:03, 20 May 2025

3D structures of elongation factor

Updated on 20-May-2025

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky, Joel L. Sussman

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