Trypsin 3D structures

From Proteopedia

Revision as of 10:40, 25 January 2024

3D structures of Trypsin

Updated on 25-January-2024 - For a general description of the protein see Trypsin {{#tree:id=OrganizedByTopic|openlevels=0|

• Cationic trypsin or trypsin-1

• • 1trn – hTry1 – human
    
  • 1hj9, 1n6x, 1n6y, 1s0q, 1utn, 1uto, 1utp, 1utq, 1tgb, 1tgc, 1tgt, 1tld, 1tpo, 2a7h, 2blv, 2blw, 2by5, 2by6, 2by7, 2by8, 2by9, 2bya, 2d8w, 2ptn, 2tga, 2tgt, 3nk8, 3nkk, 3mi4, 3mfj, 3iti, 3ptn, 3t25, 3t26, 3t27, 3t28, 3t29, 4i8g, 4i8h, 4i8j, 4i8k, 4i8l, 4tpy, 4yta, 5t3h, 5k7r, 5jyi, 5gxp, 5gib, 5fxl, 5f6m, 5ptp, 6avl, 6b6n, 6b6o, 6b6p, 6b6q, 6b6r, 6b6s, 6b6t, 6dzf, 6fid, 6sux, 6svz, 6svx, 6svv, 6svw, 6svu, 6svr, 6svn, 6svj, 6svi, 6svg, 6svd, 6svb, 6sv9, 6sv8, 6sv6, 6sv0, 6sw0, 6xyg, 7ays, 7q0x - bTry1 - bovine
    
  • 3qk1, 4niv, 4niw, 4nix – bTry1 (mutant)
    
  • 1ntp, 5mnz - bTry1 – Neutron diffraction
    
  • 1aq7, 1auj, 1az8, 1bju, 1bjv, [[[1btp]], 1bty, 1c1n, 1c1o, 1c1p, 1c1q, 1c1r, 1c1s, 1c1t, 1c2d, 1c2e, 1c2f, 1c2g, 1c2h, 1c2i, 1c2j, 1c2k, 1c2l, 1c2m, 1c5p, 1c5q, 1c5r, 1c5s, 1c5t, 1c5u, 1c5v, 1c9t, 1ce5, 1eb2, 1ejm, 1f0t, 1f0u, 1f2s, 1g3b, 1g3c, 1g3d, 1g3e, 1g9i, 1gbt, 1ghz, 1gi0, 1gi1, 1gi2, 1gi3, 1gi4, 1gi5, 1gi6, 1gj6, 1j8a, 1jir, 1k1i, 1k1j, 1k1l, 1k1m, 1k1n, 1k1o, 1k1p, 1lqe, 1max, 1may, 1mts, 1mtu, 1mtv, 1mtw, 1o2q, 1o2r, 1o2s, 1o2t, 1o2u, 1o2v, 1o2w, 1o2x, 1o2y, 1o2z, 1o30, 1o31, 1o32, 1o33, 1o34, 1o35, 1o36, 1o37, 1o38, 1o39, 1o3a, 1o3b, 1o3c, 1o3d, 1o3e, 1o3f, 1o3g, 1o3h, 1o3i, 1o3j, 1o3k, 1o3l, 1o3m, 1o3n, 1o3o, 1o3p, 1o2l, 1o2k, 1o2j, 1o2i, 1o2h, 1o2m, 1o2n, 1o2o, 1o2p, 1ox1, 1oyq, 1p2i, 1p2j, 1p2k, 1ppc, 1ppe, 1pph, 1qbn, 1qbo, 1qb9, 1qb1, 1qb6, 1qa0, 1qcp, 1ql7, 1ql8, 1ql9, 1rxp, 1s0r, 1sbw, 1taw, 1smf, 1tab, 1tio, 1tps, 1tyn, 1tng, 1tnh, 1tni, 1tnj, 1tnk, 1tnl, 1tpa, 1tpp, 1tx7, 1tx8, 1v2k, 1xuf, 1xug, 1xuh, 1xui, 1xuj, 1xuk, 1y3u, 1y3v, 1y3w, 1y3x, 1y3y, 1y59, 1y5a, 1y5b, 1y5u, 1yp9, 1zr0, 2age, 2agg, 2agi, 2ah4, 2ayw, 2btc, 2bza 2cmy, 2fi3, 2fi4, 2fi5, 2ftl, 2ftm, 2fx4, 2fx6, 2g5n, 2g5v, 2g81, 2g8t, 2j9, 2lln, 2o9q, 2otv, 2oxs, 2plx, 2qn5, 2qyi, 2tio, 2tld, 2uuy, 2xtt, 2zdk, 2zdl, 2zdm, 2zdn, 2zfs, 2zft, 2zhd, 2zq1, 2zq2, 3a7t, 3a7v, 3a7w, 3a7x, 3a7y, 3a7z, 3a80, 3a81, 3a82, 3a83, 3a84, 3a85, 3a86, 3a87, 3a88, 3a89, 3a8a, 3a8b, 3a8c, 3a8d, 3aas, 3aau, 3aav, 3ati, 3atk, 3atl, 3atm, 3bte, 3btq, 3btd, 3btf, 3btg, 3bth, 3btk, 3btm, 3btt, 3btw, 3d65, 3e8l, 3gy2, 3gy3, 3gy4, 3gy5, 3gy6, 3gy7, 3gy8 3i29, 3ljj, 3ljo, 3m35, 3m7q, 3otj, 3ptb, 3rxa, 3rxb, 3rxc, 3rxd, 3rxe, 3rxf, 3rxg, 3rxh, 3rxi, 3rxj, 3rxk, 3rxl, 3rxm, 3rxo, 3rxq, 3rxr, 3rxs, 3rxt, 3rxu, 3rxv, 3rxp, 3vpk, 4ab8, 4ab9, 4aba, 4abb, 4abd, 4abe, 4abf, 4abg, 4j2y, 4mtb, 5mnq, 5mnp, 5mno, 5mnn, 5mnm, 5mnl, 5mnk, 5mnh, 5mng, 5mnf, 5mne, 5mnb, 5mn1, 5lh8, 5lh4, 5lgo, 5eg4, 6avl, 6dzf, 6bfp, 6fid, 6ql0, 6qih, 6swv, 6sy3, 6t0m, 6t0p, 6t5w, 6t9u, 6t9v, 6yit, 6yiu, 6yiw, 6yiv, 6yix, 6yiy, 6yza, 6yzc, 6yis, 6zq2, 7bs1, 7bs8, 7brw, 7brx, 7bry, 7brz, 7bs3, 7bs4, 7bs5, 7bs6, 7brv, 7jwx, 7q0w, 7z2i, 7z25 - bTry1 + small molecule inhibitor
    
  • 1oph, 1v2j, 1v2l, 1v2m, 1v2n, 1v2o, 1v2p, 1v2q, 1v2r, 1v2s, 1v2t, 1v2u, 1v2v, 1v2w, 2ra3, 3plb, 3plk, 3plp, 3pm3, 3pmj, 3pwb, 3pwc, 3pyh, 3q00, 3unq, 3uns, 3uop, 3upe, 3uqo, 3uqv, 3uuz, 3uwi, 3uy9, 3v0x, 3v12, 3v13, 3veq - bTry1 (mutant) + small molecule inhibitor
    
  • 6dwh, 6dwf, 6dwu, 7jr1, 7jr2 – bTry1 + Kunitz inhibitor
    
  • 6mrq – bTry1 + scorpion protein inhibitor
    
  • 4u2w - bTry1 + Bowman-Birk inhibitor
    
  • 3ru4 – bTry1 + chymotrypsinogen
    
  • 4b2b, 4b1t, 4b2a, 4b2c – bTry1 (mutant) + eglin (mutant)
    
  • 1btw, 1btx, 1btz, 1jrs, 1jrt, 1sfi, 1yyy, 1zzz, 4abi, 6eax, 6eaw, 6eav, 6eau, 6eat, 6e5m, 6bvh, 6u22, 6vxy, 7al8 – bTry1 + polypeptide inhibitor
    
  • 5mnx, 5mo0, 5mo1, 5mo2, 5mon, 5mop, 5moq, 5mor, 5mos – bTry1 + inhibitor – Neutron
    
  • 4ncy - bTry1 + imidazole
    
  • 7bs2, 7bs9 - bTry1 + serotonin
    
  • 5mna, 5mnc, 7bs0, 7bs7 - bTry1 + aniline
    
  • 5mny, 5moo – bTry1 + aniline – Neutron
    
  • 4abj, 4hgc, 4xoj – bTry1 + Try inhibitor 1
    
  • 4gux - bTry1 + Try inhibitor 2
    
  • 4aoq, 4aor - bTry1 + Try inhibitor 3
    
  • 4j2y - bTry1 + Try inhibitor
    
  • 4kts, 4ktu - bTry1 + microviridin
    
  • 4niy - bTry1 (mutant) + ecotin
    
  • 4y10, 4y11, 4y0y, [[4y0yz] – bTry + BPTI
    
  • 4wxv, 4wwy – bTry (mutant) + BPTI
    
  • 5xw1, 5xw8, 5xw9, 5xwa, 5xwj, 5xwl – pTry1 + polypeptide - pig
    
  • 2eek – Try1 + inhibitor – Atlantic cod
    
  • 1hj8, 1utk, 1utj, 1utl, 1utm – Try1 – Salmon
    

• Anionic trypsin or trypsin-2

• • 1mbq, 2zpq, 2zpr, 2zps – Try2 – Chum salmon
    
  • 1bit, 2tbs - AsTry2 – Atlantic salmon
    
  • 1bzx, 2sta, 2stb - AsTry2 + proteinase inhibitor
    
  • 1a0j - AsTry2 + small molecule inhibitor
    
  • 1ane, 1bra - rTry2 - rat
    
  • 1amh, 1anb, 1anc, 1and, 1dpo, 1trm, 2trm - rTry2 (mutant)
    
  • 1brb, 1brc, 3fp6, 3tgi – rTry2 + proteinase inhibitor
    
  • 1co7, 1k9o, 1slu, 1slv, 1slw, 1slx, 1ykt, 1ylc, 1yld, 3fp7, 3fp8 - rTry2 (mutant) + proteinase inhibitor
    
  • 1j14, 1j15, 1j16, 1j17 - rTry2 (mutant) + small molecule inhibitor
    
  • 1ezs, 1ezu - rTry2 (mutant) + ecotin
    

• Anionic trypsinogen

• • 1f5r, 1f7z, 3tgk, 3tgj - rTryp2 (mutant) + proteinase inhibitor
    
  • 1fy8 - rTryp2 + proteinase inhibitor

• Trypsinogen

• • 1tgn – bTryp
    
  • 1nc6, 2tgd – bTryp + inhibitor

• Mesotrypsin or trypsin-3 or PRSS3

• • 3l33 – hTry3 (mutant) + amyloid β A4
    
  • 4u30 - hTry3 (mutant) + trypstatin
    
  • 5tpo - hTry3 + diminazene
    
  • 4u32 - hTry3 (mutant) + Kunitz inhibitor
    
  • 6gfi - hTry3 residues 28-251 + amyloid β precursor
    
  • 3l3t, 5c67, 5jbt - hTry3 residues 28-251 (mutant) + amyloid β precursor
    
  • 2r9p, 3p92, 3p95, 4dg4 – hTry3 (mutant) + BPTI
    
  • 6bx8 - hTry3 (mutant) + TFPI
    

• Brain trypsin (trypsin-3; trypsin-4)

• • 5tp0 – hTry3 + small molecule inhibitor
    
  • 5tp0 – hTry3 + amyloid b A4 protein
    
  • 1h4w – hTry4 + small molecule inhibitor

• Neurotrypsin

• • 2k4r, 2k51 – rNTry Kringle domain – NMR

• Streptomyces griseus trypsin

• • 1os8, 1sgt, 3i77, 3i78 – SGT – Streptomyces griseus
    
  • 2fmj, 3beu – SGT (mutant)
    
  • 1oss - SGT (mutant) + small molecule inhibitor
    

• Trypsin

• • 1s81 – pTry
    
  • 4doq – pTry C terminal + antileukoproteinase
    
  • 1aks - α-pTry
    
  • 1ept - ε-pTry
    
  • 1mct - β-pTry + proteinase inhibitor
    
  • 1an1, 1avw, 1avx, 1c9p, 1eja, 1h9h, 1h9i, 1ldt, 1tfx, 1tx6, 1uhb, 1v6d, 1yf4, 1z7k, 3myw, 4an7 – pTry + proteinase inhibitor
    
  • 1fmg, 1fn6, 1fni, 1qqu, 1s5s, 1s6f, 1s6h, 1s82, 1s83, 1s84, 1s85, 2a31, 2a32 – pTry + small molecule inhibitor
    
  • 2vu8 – Try + proteinase inhibitor – mold
    
  • 1pq5, 1pq7, 1xvo, 2g51, 2g52, 2g55 – FoTry – Fusarium oxysporum
    
  • 1ppz, 1pqa, 1try - FoTry + small molecule inhibitor
    
  • 1fn8, 1fy4, 1fy5, 1gdn, 1gdq, 1gdu, 1pq8, 1xvm – FoTry + polypeptide
    
  • 2f91 – Try-hepatopancreas - Crayfish
    
  • 5dk1, 5dkm, 5dj7, 5kwm – Try – Saccharopolyspora erythraea
    

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