This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4u52
From Proteopedia
(Difference between revisions)
| Line 4: | Line 4: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4u52]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ul9 4ul9], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ula 4ula], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ulb 4ulb], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ulc 4ulc] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4uld 4uld]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U52 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U52 FirstGlance]. <br> | <table><tr><td colspan='2'>[[4u52]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ul9 4ul9], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ula 4ula], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ulb 4ulb], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4ulc 4ulc] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4uld 4uld]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U52 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U52 FirstGlance]. <br> | ||
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3J2:NAGILACTONE+C'>3J2</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OHX:OSMIUM+(III)+HEXAMMINE'>OHX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3J2:NAGILACTONE+C'>3J2</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OHX:OSMIUM+(III)+HEXAMMINE'>OHX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u52 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u52 OCA], [https://pdbe.org/4u52 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u52 RCSB], [https://www.ebi.ac.uk/pdbsum/4u52 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u52 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u52 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u52 OCA], [https://pdbe.org/4u52 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u52 RCSB], [https://www.ebi.ac.uk/pdbsum/4u52 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u52 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| Line 20: | Line 21: | ||
==See Also== | ==See Also== | ||
| + | *[[Ribosome 3D structures|Ribosome 3D structures]] | ||
*[[3D sructureseceptor for activated protein kinase C 1|3D sructureseceptor for activated protein kinase C 1]] | *[[3D sructureseceptor for activated protein kinase C 1|3D sructureseceptor for activated protein kinase C 1]] | ||
== References == | == References == | ||
Current revision
Crystal structure of Nagilactone C bound to the yeast 80S ribosome
| |||||||||||
