4v9o

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Current revision (23:07, 26 March 2025) (edit) (undo)
 
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<StructureSection load='4v9o' size='340' side='right'caption='[[4v9o]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
<StructureSection load='4v9o' size='340' side='right'caption='[[4v9o]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4v9o]] is a 40 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kix 4kix], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kiy 4kiy], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kiz 4kiz], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kj0 4kj0], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kj1 4kj1], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kj2 4kj2], [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kj3 4kj3] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4kj4 4kj4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V9O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V9O FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4v9o]] is a 40 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4V9O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4V9O FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5OH:(2S)-AMINO[(4R,6S)-2-AMINO-6-HYDROXY-3,4,5,6-TETRAHYDROPYRIMIDIN-4-YL]ETHANOIC+ACID'>5OH</scene>, <scene name='pdbligand=DPP:DIAMINOPROPANOIC+ACID'>DPP</scene>, <scene name='pdbligand=GCP:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANYLATE+ESTER'>GCP</scene>, <scene name='pdbligand=KBE:BETA-LYSINE'>KBE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UAL:(2Z)-2-AMINO-3-(CARBAMOYLAMINO)PROP-2-ENOIC+ACID'>UAL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5OH:(2S)-AMINO[(4R,6S)-2-AMINO-6-HYDROXY-3,4,5,6-TETRAHYDROPYRIMIDIN-4-YL]ETHANOIC+ACID'>5OH</scene>, <scene name='pdbligand=DPP:DIAMINOPROPANOIC+ACID'>DPP</scene>, <scene name='pdbligand=GCP:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANYLATE+ESTER'>GCP</scene>, <scene name='pdbligand=KBE:BETA-LYSINE'>KBE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UAL:(2Z)-2-AMINO-3-(CARBAMOYLAMINO)PROP-2-ENOIC+ACID'>UAL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v9o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v9o OCA], [https://pdbe.org/4v9o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v9o RCSB], [https://www.ebi.ac.uk/pdbsum/4v9o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v9o ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4v9o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4v9o OCA], [https://pdbe.org/4v9o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4v9o RCSB], [https://www.ebi.ac.uk/pdbsum/4v9o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4v9o ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[https://www.uniprot.org/uniprot/RS6_ECOLI RS6_ECOLI] Binds together with S18 to 16S ribosomal RNA.[HAMAP-Rule:MF_00360]
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[https://www.uniprot.org/uniprot/RL9_ECOLI RL9_ECOLI] One of the primary rRNA binding proteins, it binds very close to the 3' end of the 23S rRNA.[HAMAP-Rule:MF_00503]
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== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==

Current revision

Control of ribosomal subunit rotation by elongation factor G

PDB ID 4v9o

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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