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Gp41 3D Structures
From Proteopedia
(Difference between revisions)
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| - | *Gp41 from HIV-1; Domains – helix-bundle – 1-40; core 509-661; N-peptide 541-590; transmembrane 670-709; tail 750-854 | + | *Gp41 from HIV-1; Domains – helix-bundle – 1-40; ectodomain – 93-165;core 509-661; N-peptide 541-590; transmembrane 670-709; tail 750-854 |
**[[2zfc]], [[3u91]] – Gp41 N-terminal residues 1-49 <br /> | **[[2zfc]], [[3u91]] – Gp41 N-terminal residues 1-49 <br /> | ||
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**[[1aik]], [[1df4]], [[1df5]], [[1qr8]], [[1qr9]], [[1dlb]], [[1jpx]], [[1szt]], [[3vu5]], [[3vu6]] - Gp41 N-peptide domain <br /> | **[[1aik]], [[1df4]], [[1df5]], [[1qr8]], [[1qr9]], [[1dlb]], [[1jpx]], [[1szt]], [[3vu5]], [[3vu6]] - Gp41 N-peptide domain <br /> | ||
**[[1env]], [[3cp1]], [[3cyo]], [[1f23]], [[1k33]], [[1k34]], [[1i5x]], [[1i5y]], [[2ot5]], [[5ka6]], [[5ka5]], [[4i2l]] – Gp41 N-peptide domain (mutant)<br /> | **[[1env]], [[3cp1]], [[3cyo]], [[1f23]], [[1k33]], [[1k34]], [[1i5x]], [[1i5y]], [[2ot5]], [[5ka6]], [[5ka5]], [[4i2l]] – Gp41 N-peptide domain (mutant)<br /> | ||
| - | **[[6b3u]], [[6dln]], [[7loi]] – Gp41 transmembrane domain - NMR<br /> | + | **[[5jyn]], [[6b3u]], [[6dln]], [[7loi]] – Gp41 transmembrane domain - NMR<br /> |
| + | **[[2mk3]] – Gp41 ectodomain - NMR<br /> | ||
**[[5vwl]] – Gp41 tail domain - NMR<br /> | **[[5vwl]] – Gp41 tail domain - NMR<br /> | ||
**[[6uju]], [[6ujv]], [[7loh]] – Gp41 transmembrane+tail domains (mutant) - NMR<br /> | **[[6uju]], [[6ujv]], [[7loh]] – Gp41 transmembrane+tail domains (mutant) - NMR<br /> | ||
| - | **[[3f50]] – Gp41 + Gp120 six-helix bundle<br /> | + | **[[3f4y]], [[3f4z]], [[3f50]] – Gp41 + Gp120 six-helix bundle<br /> |
*Gp41 complexes | *Gp41 complexes | ||
| - | **[[6v0r]], [[6vfl]], [[6vl5]], [[6vrw]], [[7l6o]], [[7l7t]], [[7l7u]], [[7ska]] – Gp41 core + Gp120 – Cryo EM <br /> | + | **[[6v0r]], [[6vfl]], [[6vl5]], [[6vrw]], [[7l6o]], [[7l7t]], [[7l7u]], [[7sc5]], [[7ska]] – Gp41 core + Gp120 – Cryo EM <br /> |
| - | **[[5v8l]], [[5v8m]], [[5uty]], [[5utf]], [[5um8]], [[5jsa]], [[5js9]], [[5i8h]], [[5d9q]], [[5cjx]], [[5c7k]], [[6ck9]], [[6chb]], [[6ch9]], [[6ch8]], [[6ch7]], [[5w6d]], [[4nrx]], [[5fyk]], [[5fyj]], [[4nco]], [[6mdt]], [[6mco]], [[6wix]] – Gp41 core + Gp120 + antibody<br /> | + | **[[5v8l]], [[5v8m]], [[5uty]], [[5utf]], [[5um8]], [[5jsa]], [[5js9]], [[5i8h]], [[5d9q]], [[5cjx]], [[5c7k]], [[6ck9]], [[6chb]], [[6ch9]], [[6ch8]], [[6ch7]], [[5w6d]], [[4nrx]], [[5fyk]], [[5fyj]], [[4nco]], [[6mdt]], [[6mco]], [[6vkn]], [[6wix]] – Gp41 core + Gp120 + antibody<br /> |
**[[7l6o]] – Gp41 core + Gp120 Clade A/E (mutant) <br /> | **[[7l6o]] – Gp41 core + Gp120 Clade A/E (mutant) <br /> | ||
| - | **[[6mpg]], [[6n1v]], [[6nfc]], [[6x96]], [[6x97]], [[7kde]], [[7lg6]], [[7lu9]], [[7lxm]], [[7lxn]], [[7ly9]], [[7mdt]], [[7mdu]], [[7mxe]], [[7pc2]], [[7rsn]], [[7rso]], [[7sd3]], [[7tfn]], [[7tfo]], [[7ugn]], [[7ugp]], [[7ugq]], [[7zlk]], [[8fis]] – Gp41 core + Gp120 Clade A/E + antibody – Cryo EM<br /> | + | **[[3j5m]], [[6mpg]], [[6mph]], [[6n1v]], [[6n1w]], [[6nfc]], [[6x96]], [[6x97]], [[7kde]], [[7lg6]], [[7lu9]], [[7lxm]], [[7lxn]], [[7ly9]], [[7mdt]], [[7mdu]], [[7mxe]], [[7pc2]], [[7rsn]], [[7rso]], [[7sd3]], [[7sq1]], [[7t73]], [[7t74]], [[7t75]], [[7t76]], [[7t77]],[[7tfn]], [[7tfo]], [[7ugn]], [[7ugp]], [[7ugq]], [[7zlk]], [[7z3a]], [[8fis]] – Gp41 core + Gp120 Clade A/E + antibody – Cryo EM<br /> |
**[[6ot1]], [[6x98]], [[7n28]] – Gp41 (mutant) + Gp120 Clade A/E (mutant) + antibody – Cryo EM<br /> | **[[6ot1]], [[6x98]], [[7n28]] – Gp41 (mutant) + Gp120 Clade A/E (mutant) + antibody – Cryo EM<br /> | ||
**[[6nnj]], [[6nnf]], [[6nm6]] – Gp41 core (mutant) + Gp120 + antibody<br /> | **[[6nnj]], [[6nnf]], [[6nm6]] – Gp41 core (mutant) + Gp120 + antibody<br /> | ||
**[[6opa]], [[6vzi]], [[6w03]] – Gp41 core + Gp160 + antibody<br /> | **[[6opa]], [[6vzi]], [[6w03]] – Gp41 core + Gp160 + antibody<br /> | ||
**[[6oz4]], [[6ozc]], [[6vn0]], [[7ugo]] – Gp41 core + Gp160 + antibody – Cryo EM<br /> | **[[6oz4]], [[6ozc]], [[6vn0]], [[7ugo]] – Gp41 core + Gp160 + antibody – Cryo EM<br /> | ||
| - | **[[6cdi]], [[6orn]], [[6oo]], [[6orp]], [[6orq]], [[6okp]], [[6nqd]], [[6mn7]], [[6cuf]], [[6cue]], [[6olp]], [[6pw6]], [[6u59]], [[6uda]], [[6udk]], [[6ulc]], [[6um6]], [[6um7]], [[6v8x]], [[6v8z]], [[6vlr]], [[6vo0]], [[6vo1]], [[6vtt]], [[6vy2]], [[6nf5]], [[6nfc]], [[6oro]], [[6u59]], [[6vi0]], [[6vo3]], [[6x9r]], [[6x9s]], [[6x9t]], [[6x9u]], [[6x9v]], [[7l86]], [[7l87]], [[7l88]], [[7l89]], [[7l8a]], [[7l8b]], [[7l8c]], [[7l8d]], [[7l8s]], [[7l8t]], [[7l8u]], [[7l8w]], [[7l8x]], [[7l8y]], [[7l8z]], [[7l90]], [[7ll1]], [[7ll2]], [[7llk]], [[7lo6]], [[7lua]], [[7mxd]] – Gp41 core + Gp120 + antibody – Cryo EM<br /> | + | **[[7lpn]] – Gp41 core + Gp160 + VHH – Cryo EM<br /> |
| - | **[[4tvp]], [[6v6w]], [[7ucf]] – Gp41 core + Gp120 + antibody <br /> | + | **[[4cc8]], [[6cdi]], [[6orn]], [[6oo]], [[6orp]], [[6orq]], [[6okp]], [[6nqd]], [[6mn7]], [[6cuf]], [[6cue]], [[6olp]], [[6pw6]], [[6u59]], [[6uda]], [[6udk]], [[6ulc]], [[6um6]], [[6um7]], [[6v8x]], [[6v8z]], [[6vlr]], [[6vo0]], [[6vo1]], [[6vtt]], [[6vy2]], [[6nf5]], [[6nf2]], [[6nfc]], [[6oro]], [[6osy]], [[6u59]], [[6vi0]], [[6vo3]], [[6x9r]], [[6x9s]], [[6x9t]], [[6x9u]], [[6x9v]], [[6xrt]], [[7l86]], [[7l87]], [[7l88]], [[7l89]], [[7l8a]], [[7l8b]], [[7l8c]], [[7l8d]], [[7l8s]], [[7l8t]], [[7l8u]], [[7l8w]], [[7l8x]], [[7l8y]], [[7l8z]], [[7l90]], [[7ll1]], [[7ll2]], [[7llk]], [[7lo6]], [[7lua]], [[7mxd]], [[7n65]], [[7pc2]], [[7rai]], [[7t74]], [[7t76]], [[7ucg]] – Gp41 core + Gp120 + antibody – Cryo EM<br /> |
| + | **[[4tvp]], [[6utk]], [[6v6w]], [[7kmd]], [[7ucf]] – Gp41 core + Gp120 + antibody <br /> | ||
**[[6nc3]], [[6nc2]] – Gp41 core (mutant) + Gp120 + antibody – Cryo EM<br /> | **[[6nc3]], [[6nc2]] – Gp41 core (mutant) + Gp120 + antibody – Cryo EM<br /> | ||
**[[5u1f]], [[5thr]] – Gp41 core + Gp120 + antibody + CD4<br /> | **[[5u1f]], [[5thr]] – Gp41 core + Gp120 + antibody + CD4<br /> | ||
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**[[6opn]], [[6x5c]] – Gp41 core + Gp160 + CD4 – Cryo EM<br /> | **[[6opn]], [[6x5c]] – Gp41 core + Gp160 + CD4 – Cryo EM<br /> | ||
**[[6opo]], [[6opp]], [[6opq]], [[6u0l]] – Gp41 core + Gp160 + antibody + CD4 – Cryo EM<br /> | **[[6opo]], [[6opp]], [[6opq]], [[6u0l]] – Gp41 core + Gp160 + antibody + CD4 – Cryo EM<br /> | ||
| + | **[[7txd]] – Gp41 core + Gp120 + darpin + CD4 – Cryo EM<br /> | ||
**[[6um5]] – Gp41 core + Gp120 + antibody + CH848 – Cryo EM<br /> | **[[6um5]] – Gp41 core + Gp120 + antibody + CH848 – Cryo EM<br /> | ||
**[[6vpx]], [[7lok]] – Gp41 core + Gp120 + antibody + peptide – Cryo EM<br /> | **[[6vpx]], [[7lok]] – Gp41 core + Gp120 + antibody + peptide – Cryo EM<br /> | ||
[[2z2t]], [[2zzo]], [[3aha]], [[3vie]], [[2r3c]], [[2r5b]], [[2r5d]], [[3l36]], [[3l37]], [[3vgy]], [[3vh7]], [[3vtp]], [[5h0n]], [[5zpw]] – Gp41 N-peptide domain + fusion inhibitor peptide<br /> | [[2z2t]], [[2zzo]], [[3aha]], [[3vie]], [[2r3c]], [[2r5b]], [[2r5d]], [[3l36]], [[3l37]], [[3vgy]], [[3vh7]], [[3vtp]], [[5h0n]], [[5zpw]] – Gp41 N-peptide domain + fusion inhibitor peptide<br /> | ||
**[[5hm1]] – Gp41 core + llama antibody <br /> | **[[5hm1]] – Gp41 core + llama antibody <br /> | ||
| + | **[[3p30]] – Gp41 ectodomain + antibody<br /> | ||
**[[3o3x]] – arGp41 - artificial<br /> | **[[3o3x]] – arGp41 - artificial<br /> | ||
**[[4dzu]] – arGp41 + 3-α<br /> | **[[4dzu]] – arGp41 + 3-α<br /> | ||
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**[[2ezo]], [[2ezp]], [[2ezq]], [[2ezr]], [[2ezs]], [[1qce]] – Gp41 core - NMR<br /> | **[[2ezo]], [[2ezp]], [[2ezq]], [[2ezr]], [[2ezs]], [[1qce]] – Gp41 core - NMR<br /> | ||
**[[1qbz]], [[1jq0]] – Gp41 core (mutant)<br /> | **[[1qbz]], [[1jq0]] – Gp41 core (mutant)<br /> | ||
| - | **[[7t2p]], [[8dua]] – Gp41 core + Gp120 + antibody – Cryo EM<br /> | + | **[[7t2p]], [[7t4g]], [[8dua]] – Gp41 core + Gp120 + antibody – Cryo EM<br /> |
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 10:41, 16 April 2023
3D Structures of Gp41
Updated on 16-April-2023
2z2t, 2zzo, 3aha, 3vie, 2r3c, 2r5b, 2r5d, 3l36, 3l37, 3vgy, 3vh7, 3vtp, 5h0n, 5zpw – Gp41 N-peptide domain + fusion inhibitor peptide
