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=== Proline/Glycine Hinge ===
=== Proline/Glycine Hinge ===
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<scene name='95/952697/Ntcp_open-pore_state/37'>Glycine and proline residues</scene> in the <scene name='95/952697/Ntcp_open-pore_state/38'>connecting loops</scene> and <scene name='95/952697/Ntcp_open-pore_state/36'>extra- (ECH) and intracellular helices (ICH)</scene> (Figure 3) act as hinges between the <scene name='95/952697/Ntcp_open-pore_state/39'>open pore state</scene> and <scene name='95/952697/Ntcp_inward_facing_state/4'>inward-facing states</scene> in the mechanism of bile salt uptake. This flexibility allows separation of the core and panel domains, creating a pore open to the extracellular space and exposing critical Na+ binding sites. Once substrate binds the open-pore state, this hinge allows the transition to close this pore relative to the extracellular side and open to the cytoplasmic side, thus allowing release of substrate into the cell.<ref name = "Goutam" />
+
<scene name='95/952697/Ntcp_open-pore_state/40'>Glycine and proline residues</scene> in the <scene name='95/952697/Ntcp_open-pore_state/38'>connecting loops</scene> and <scene name='95/952697/Ntcp_open-pore_state/36'>extra- (ECH) and intracellular helices (ICH)</scene> (Figure 3) act as hinges between the <scene name='95/952697/Ntcp_open-pore_state/39'>open pore state</scene> and <scene name='95/952697/Ntcp_inward_facing_state/4'>inward-facing states</scene> in the mechanism of bile salt uptake. This flexibility allows separation of the core and panel domains, creating a pore open to the extracellular space and exposing critical Na+ binding sites. Once substrate binds the open-pore state, this hinge allows the transition to close this pore relative to the extracellular side and open to the cytoplasmic side, thus allowing release of substrate into the cell.<ref name = "Goutam" />
=== Sodium Binding Sites ===
=== Sodium Binding Sites ===

Revision as of 01:22, 16 April 2023

Sodium-taurocholate Co-transporting Polypeptide

Sodium-taurocholate co-transporting Polypeptide (NTCP). The top is extracellular in relation to the hepatocyte, and the bottom is intracellular. Purple spheres represent Na+ ions and grey surfaces represent substrate. (PDB: 7ZYI)

Drag the structure with the mouse to rotate

References

  1. 1.0 1.1 1.2 1.3 Goutam K, Ielasi FS, Pardon E, Steyaert J, Reyes N. Structural basis of sodium-dependent bile salt uptake into the liver. Nature. 2022 Jun;606(7916):1015-1020. DOI: 10.1038/s41586-022-04723-z.
  2. 2.0 2.1 2.2 2.3 Asami J, Kimura KT, Fujita-Fujiharu Y, Ishida H, Zhang Z, Nomura Y, Liu K, Uemura T, Sato Y, Ono M, Yamamoto M, Noda T, Shigematsu H, Drew D, Iwata S, Shimizu T, Nomura N, Ohto U. Structure of the bile acid transporter and HBV receptor NTCP. Nature. 2022 Jun; 606 (7916):1021-1026. DOI: 10.1038/s41586-022-04845-4.
  3. 3.0 3.1 Park JH, Iwamoto M, Yun JH, Uchikubo-Kamo T, Son D, Jin Z, Yoshida H, Ohki M, Ishimoto N, Mizutani K, Oshima M, Muramatsu M, Wakita T, Shirouzu M, Liu K, Uemura T, Nomura N, Iwata S, Watashi K, Tame JRH, Nishizawa T, Lee W, Park SY. Structural insights into the HBV receptor and bile acid transporter NTCP. Nature. 2022 Jun;606(7916):1027-1031. DOI: 10.1038/s41586-022-04857-0.
  4. 4.0 4.1 4.2 4.3 Liu H, Irobalieva RN, Bang-Sørensen R, Nosol K, Mukherjee S, Agrawal P, Stieger B, Kossiakoff AA, Locher KP. Structure of human NTCP reveals the basis of recognition and sodium-driven transport of bile salts into the liver. Cell Res. 2022 Aug;32(8):773-776. DOI: 10.1038/s41422-022-00680-4.
  5. Qi X, Li W. Unlocking the secrets to human NTCP structure. Innovation (Camb). 2022 Aug 1;3(5):100294. DOI: 10.1016/j.xinn.2022.100294.
  6. 6.0 6.1 Zhang X, Zhang Q, Peng Q, Zhou J, Liao L, Sun X, Zhang L, Gong T. Hepatitis B virus preS1-derived lipopeptide functionalized liposomes for targeting of hepatic cells. Biomaterials. 2014 Jul;35(23):6130-41. DOI: 10.1016/j.biomaterials.2014.04.037.
  7. 7.0 7.1 7.2 Patton JS, Carey MC. Watching fat digestion. Science. 1979 Apr 13;204(4389):145-8. DOI: 10.1126/science.432636.
  8. Donkers JM, Kooijman S, Slijepcevic D, Kunst RF, Roscam Abbing RL, Haazen L, de Waart DR, Levels JH, Schoonjans K, Rensen PC, Oude Elferink RP, van de Graaf SF. NTCP deficiency in mice protects against obesity and hepatosteatosis. JCI Insight. 2019 Jun 25;5(14):e127197. DOI: 10.1172/jci.insight.127197.
  9. 9.0 9.1 Shimura S, Watashi K, Fukano K, Peel M, Sluder A, Kawai F, Iwamoto M, Tsukuda S, Takeuchi JS, Miyake T, Sugiyama M, Ogasawara Y, Park SY, Tanaka Y, Kusuhara H, Mizokami M, Sureau C, Wakita T. Cyclosporin derivatives inhibit hepatitis B virus entry without interfering with NTCP transporter activity. J Hepatol. 2017 Apr;66(4):685-692. doi: 10.1016/j.jhep.2016.11.009. DOI: 10.1016/j.jhep.2016.11.009.

Student Contributors

  • Ben Minor
  • Maggie Samm
  • Zac Stanley
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