Gyrase 3D Structures
From Proteopedia
(Difference between revisions)
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**[[6n1p]] – SpGyrA N-terminal + DNA – Cryo EM<br /> | **[[6n1p]] – SpGyrA N-terminal + DNA – Cryo EM<br /> | ||
**[[5ztj]] - SeGyrA C-terminal – ''Salmonella enterica''<br /> | **[[5ztj]] - SeGyrA C-terminal – ''Salmonella enterica''<br /> | ||
| + | **[[8j9t]] - SeGyrA N-terminal <br /> | ||
*Gyrase Subunit B; Domains – ATPase or N-terminal 1-220; C-terminal 448-675 | *Gyrase Subunit B; Domains – ATPase or N-terminal 1-220; C-terminal 448-675 | ||
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**[[4wub]], [[4wuc]], [[4wud]], [[4xtj]] - EcGyrB N-terminal<br /> | **[[4wub]], [[4wuc]], [[4wud]], [[4xtj]] - EcGyrB N-terminal<br /> | ||
**[[1kzn]], [[1ei1]], [[1aj6]] - EcGyrB N-terminal+ antibiotic<br /> | **[[1kzn]], [[1ei1]], [[1aj6]] - EcGyrB N-terminal+ antibiotic<br /> | ||
| - | **[[4duh]], [[4zvi]], [[5l3j]], [[6f8j]], [[4hyp]], [[6f86]], [[5z9q]], [[5z9p]], [[5z9b]], [[5z9e]], [[5z9f]], [[5z9l]], [[5z9m]], [[5z9n]], [[5z4o]], [[5z4h]], [[6yd9]], [[7c7n]], [[7c7o]], [[7dor]], [[7dpr]], [[7dps]], [[7dqf]], [[7dqh]], [[7dqj]], [[7dqm]], [[7dqs]], [[7dqu]], [[7p2m]], [[7p2n]], [[7p2w]], [[7p2x]] - EcGyrB N-terminal+ inhibitor<br /> | + | **[[4duh]], [[4zvi]], [[5l3j]], [[6f8j]], [[4hyp]], [[6f86]], [[5z9q]], [[5z9p]], [[5z9b]], [[5z9e]], [[5z9f]], [[5z9l]], [[5z9m]], [[5z9n]], [[5z4o]], [[5z4h]], [[6yd9]], [[7c7n]], [[7c7o]], [[7dor]], [[7dpr]], [[7dps]], [[7dqf]], [[7dqh]], [[7dqi]], [[7dqj]], [[7dql]], [[7dqm]], [[7dqs]], [[7dqu]], [[7dqw]], [[7p2m]], [[7p2n]], [[7p2w]], [[7p2x]] - EcGyrB N-terminal+ inhibitor<br /> |
**[[4prv]], [[4prx]], [[4pu9]] - EcGyrB N-terminal+ ADP<br /> | **[[4prv]], [[4prx]], [[4pu9]] - EcGyrB N-terminal+ ADP<br /> | ||
**[[5mmn]], [[5mmo]], [[5mmp]] - EcGyrB N-terminal + antibacterial<br /> | **[[5mmn]], [[5mmo]], [[5mmp]] - EcGyrB N-terminal + antibacterial<br /> | ||
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**[[6m1j]], [[6m1s]], [[7ptf]], [[7ptg]], [[8bn6]] - GyrB ATPase domain + inhibitor – ''Pseudomonas aeruginosa''<br /> | **[[6m1j]], [[6m1s]], [[7ptf]], [[7ptg]], [[8bn6]] - GyrB ATPase domain + inhibitor – ''Pseudomonas aeruginosa''<br /> | ||
**[[6y8l]], [[6y8n]], [[6y8o]] - GyrB ATPase domain + drug – ''Mycobacterium thermoresistibile''<br /> | **[[6y8l]], [[6y8n]], [[6y8o]] - GyrB ATPase domain + drug – ''Mycobacterium thermoresistibile''<br /> | ||
| - | **[[7pqm]] - AbGyrB ATPase domain + inhibitor – Acinetobacter baumannii<br /> | + | **[[7qpl]], [[7pqm]] - AbGyrB ATPase domain + inhibitor – Acinetobacter baumannii<br /> |
**[[7pqi]] - AbGyrB ATPase domain + antibiotic<br /> | **[[7pqi]] - AbGyrB ATPase domain + antibiotic<br /> | ||
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**[[6qx2]], [[6qx1]], [[6qtp]], [[6qtk]] – SaGyrA + SaGyrB + DNA + inhibitor<br /> | **[[6qx2]], [[6qx1]], [[6qtp]], [[6qtk]] – SaGyrA + SaGyrB + DNA + inhibitor<br /> | ||
**[[5cdq]], [[6fqm]], [[6fqs]] - SaGyrB + GyrA + DNA + antibiotic<br /> | **[[5cdq]], [[6fqm]], [[6fqs]] - SaGyrB + GyrA + DNA + antibiotic<br /> | ||
| - | **[[5bs3]], [[5iwi]], [[5iwm]], [[6qx2]], [[6qx1]], [[6qtp]], [[6qtk]] - SaGyrB + GyrA + DNA + inhibitor<br /> | + | **[[5bs3]], [[5iwi]], [[5iwm]], [[6qx2]], [[6qx1]], [[6qtp]], [[6qtk]], [[9n26]], [[9n39]] - SaGyrB + GyrA + DNA + inhibitor<br /> |
| - | **[[6fm4]], [[7mvs]] - SaGyrB (mutant) + GyrA + DNA + inhibitor<br /> | + | **[[6fm4]], [[7fvs]], [[7fvt]], [[7mvs]] - SaGyrB (mutant) + GyrA + DNA + inhibitor<br /> |
**[[5cdm]] – SaGyrA + SaGyrB (mutant) + DNA<br /> | **[[5cdm]] – SaGyrA + SaGyrB (mutant) + DNA<br /> | ||
| - | **[[5cdr]] – SaGyrA (mutant) + SaGyrB (mutant) + DNA<br /> | + | **[[5cdr]], [[9fz6]] – SaGyrA (mutant) + SaGyrB (mutant) + DNA<br /> |
| - | **[[4z2c]], [[4z2d]] - SpGyrB + GyrA + DNA | + | **[[4z2c]], [[4z2d]] - SpGyrB + GyrA + DNA <br /> |
**[[4z2e]] - SpGyrB + GyrA + DNA + antibiotic<br /> | **[[4z2e]] - SpGyrB + GyrA + DNA + antibiotic<br /> | ||
**[[6gav]], [[6gau]] - MtGyrB + GyrA <br /> | **[[6gav]], [[6gau]] - MtGyrB + GyrA <br /> | ||
| - | **[[5bs8]], [[5bta]], [[5btd]], [[5btg]], [[5btl]] - MtGyrB + GyrA + DNA + antibiotic<br /> | + | **[[5bs8]], [[5bta]], [[5btd]], [[5btg]], [[5btl]], [[8s7o]] - MtGyrB + GyrA + DNA + antibiotic<br /> |
**[[5btc]], [[5btf]], [[5bti]], [[5btn]] - MtGyrB + GyrA (mutant) + DNA + antibiotic<br /> | **[[5btc]], [[5btf]], [[5bti]], [[5btn]] - MtGyrB + GyrA (mutant) + DNA + antibiotic<br /> | ||
| + | **[[9foy]] - MtGyrB + GyrA + DNA + inhibitor<br /> | ||
**[[7ugw]] - MtGyrB + GyrA (mutant) + DNA + inhibitor<br /> | **[[7ugw]] - MtGyrB + GyrA (mutant) + DNA + inhibitor<br /> | ||
| - | + | 3nuh – EcGyrA+EcGyrB | |
| - | **[[6rks]], [[6rku]], [[6rkv]], [[6rkw]] - EcGyrA + GyrB + DNA – Cryo EM<br /> | + | **[[6rks]], [[6rku]], [[6rkv]], [[6rkw]], [[8qdx]], [[8qqi]], [[8qqs]], [[8qqu]], [[9gbv]] - EcGyrA + GyrB + DNA – Cryo EM<br /> |
| - | **[[7z9c]], [[7z9g]], [[7z9k]] - EcGyrA + GyrB + DNA + antibiotic – Cryo EM<br /> | + | **[[7z9m]] - EcGyrA + GyrB + DNA + pyridine derivative – Cryo EM<br /> |
| + | **[[7z9c]], [[7z9g]], [[7z9k]], [[8bp2]], [[9ggq]] - EcGyrA + GyrB + DNA + antibiotic – Cryo EM<br /> | ||
*Gyrase | *Gyrase | ||
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**[[3oiy]], [[3p4y]] – TmTop-RG helicase domain – ''Thermotoga maritima''<br /> | **[[3oiy]], [[3p4y]] – TmTop-RG helicase domain – ''Thermotoga maritima''<br /> | ||
**[[4ddt]], [[4ddu]], [[4ddv]], [[4ddw]], [[4ddx]] - TmTop-RG | **[[4ddt]], [[4ddu]], [[4ddv]], [[4ddw]], [[4ddx]] - TmTop-RG | ||
| + | **[[7fse]], [[7fsf]], [[8ofb]] – TmTop-RG (mutant) | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Revision as of 09:39, 7 August 2025
3D Structure of Gyrase
Updated on 07-August-2025
3nuh – EcGyrA+EcGyrB
