This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


8ow1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:31, 9 August 2023) (edit) (undo)
 
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 8ow1 is ON HOLD until Paper Publication
+
==Cryo-EM structure of the yeast Inner kinetochore bound to a CENP-A nucleosome.==
 +
<StructureSection load='8ow1' size='340' side='right'caption='[[8ow1]], [[Resolution|resolution]] 3.70&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[8ow1]] is a 18 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8OW1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8OW1 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.7&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8ow1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8ow1 OCA], [https://pdbe.org/8ow1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8ow1 RCSB], [https://www.ebi.ac.uk/pdbsum/8ow1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8ow1 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CBF1_YEAST CBF1_YEAST] Required for chromosome stability and methionine prototrophy. It is involved in chromosomal segregation. Binds to a highly conserved DNA sequence (5'-RTCACRTG-3'), called CDEI, found in centromeres and in several promoters. DNA-binding activity is enhanced by MET28. Required as an auxiliary factor for transcriptional activation of sulfur metabolism together with MET4 and MET28.<ref>PMID:1549123</ref> <ref>PMID:8665859</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The point centromere of budding yeast specifies assembly of the large kinetochore complex to mediate chromatid segregation. Kinetochores comprise the centromere-associated inner kinetochore (CCAN) complex and the microtubule-binding outer kinetochore KNL1-MIS12-NDC80 (KMN) network. The budding yeast inner kinetochore also contains the DNA binding centromere-binding factor 1 (CBF1) and CBF3 complexes. We determined the cryo-electron microscopy structure of the yeast inner kinetochore assembled onto the centromere-specific centromere protein A nucleosomes (CENP-A(Nuc)). This revealed a central CENP-A(Nuc) with extensively unwrapped DNA ends. These free DNA duplexes bind two CCAN protomers, one of which entraps DNA topologically, positioned on the centromere DNA element I (CDEI) motif by CBF1. The two CCAN protomers are linked through CBF3 forming an arch-like configuration. With a structural mechanism for how CENP-A(Nuc) can also be linked to KMN involving only CENP-QU, we present a model for inner kinetochore assembly onto a point centromere and how it organizes the outer kinetochore for chromosome attachment to the mitotic spindle.
-
Authors: Dendooven, T.D., Zhang, Z., Yang, J., McLaughlin, S., Schwabb, J., Scheres, S., Yatskevich, S., Barford, D.
+
Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere.,Dendooven T, Zhang Z, Yang J, McLaughlin SH, Schwab J, Scheres SHW, Yatskevich S, Barford D Sci Adv. 2023 Jul 28;9(30):eadg7480. doi: 10.1126/sciadv.adg7480. Epub 2023 Jul , 28. PMID:37506202<ref>PMID:37506202</ref>
-
Description: Cryo-EM structure of the yeast Inner kinetochore bound to a CENP-A nucleosome.
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Barford, D]]
+
<div class="pdbe-citations 8ow1" style="background-color:#fffaf0;"></div>
-
[[Category: Mclaughlin, S]]
+
== References ==
-
[[Category: Yang, J]]
+
<references/>
-
[[Category: Zhang, Z]]
+
__TOC__
-
[[Category: Schwabb, J]]
+
</StructureSection>
-
[[Category: Yatskevich, S]]
+
[[Category: Large Structures]]
-
[[Category: Dendooven, T.D]]
+
[[Category: Saccharomyces cerevisiae]]
-
[[Category: Scheres, S]]
+
[[Category: Barford D]]
 +
[[Category: Dendooven TD]]
 +
[[Category: McLaughlin S]]
 +
[[Category: Scheres S]]
 +
[[Category: Schwabb J]]
 +
[[Category: Yang J]]
 +
[[Category: Yatskevich S]]
 +
[[Category: Zhang Z]]

Current revision

Cryo-EM structure of the yeast Inner kinetochore bound to a CENP-A nucleosome.

PDB ID 8ow1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools