Malate Dehydrogenase 3D structures
From Proteopedia
(Difference between revisions)
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**[[4i1i]] – LmMd + NAD – ''Leishmania major''<br /> | **[[4i1i]] – LmMd + NAD – ''Leishmania major''<br /> | ||
**[[5ujk]] – MeMd + NAD - ''Methylobacterium extorquens'' <br /> | **[[5ujk]] – MeMd + NAD - ''Methylobacterium extorquens'' <br /> | ||
| - | **[[5nuf]], [[5nue]] – | + | **[[5nuf]], [[5nue]] – AtMd1 + NAD – ''Arabidopsis thaliana''<br /> |
**[[4uup]] – Md + NADH - ''Trichiminad'' <br /> | **[[4uup]] – Md + NADH - ''Trichiminad'' <br /> | ||
**[[5kvv]] – MtMd + NADH – ''Mycobacterium tuberculosis'' <br /> | **[[5kvv]] – MtMd + NADH – ''Mycobacterium tuberculosis'' <br /> | ||
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**[[6zn7]] – BbMd + NADP – ''Bdellovibrio bacteriovorus''<br /> | **[[6zn7]] – BbMd + NADP – ''Bdellovibrio bacteriovorus''<br /> | ||
**[[7f8d]], [[7x1l]] – GsMd (mutant) + NADH – ''Geobacillus stearophilus''<br /> | **[[7f8d]], [[7x1l]] – GsMd (mutant) + NADH – ''Geobacillus stearophilus''<br /> | ||
| + | **[[8rs5]], [[9qcg]] – MkMd + NDP – ''Methanopyrus kandleri''<br /> | ||
| + | **[[8rwl]], [[9end]] – MkMd (mutant) + NDP <br /> | ||
| + | **[[9sa7]] – MjMd + NDP – ''Methanocaldococcus jannaschii''<br /> | ||
| + | **[[9sc9]] – MjMd (mutant) + NDP <br /> | ||
| + | **[[9sd3]] – Md + NDP – ''Methanocaldococcus infernus''<br /> | ||
| + | **[[9s3k]], [[9s3y]] – Md + NDP – ancestral ''Methanocaldococcus'' <br /> | ||
* Md binary complex | * Md binary complex | ||
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**[[5kka]] – EcMd + inhibitor <br /> | **[[5kka]] – EcMd + inhibitor <br /> | ||
**[[5z3w]], [[6ka0]] – EcMd + Ag<br /> | **[[5z3w]], [[6ka0]] – EcMd + Ag<br /> | ||
| + | **[[9wxs]] – EcMd (mutant) + Ag<br /> | ||
**[[2cmd]] - EcMd + citrate<br /> | **[[2cmd]] - EcMd + citrate<br /> | ||
**[[3gvi]] - BmMDH+ADP<br /> | **[[3gvi]] - BmMDH+ADP<br /> | ||
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**[[6zng]], [[6znt]] – BbMd + acetyl-CoA<br /> | **[[6zng]], [[6znt]] – BbMd + acetyl-CoA<br /> | ||
**[[6znu]] – BbMd (mutant) + acetyl-CoA<br /> | **[[6znu]] – BbMd (mutant) + acetyl-CoA<br /> | ||
| + | **[[8ggd]], [[8ggh]], [[8gh2]], [[8gh3]], [[9fef]] – TcMd + PEX5 – ''Trypanosoma cruzi'' – Cryo EM<br /> | ||
* Md ternary complex | * Md ternary complex | ||
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**[[4wlu]] – hMd2 + NADH + malate <br /> | **[[4wlu]] – hMd2 + NADH + malate <br /> | ||
**[[5mdh]] – pMd+NAD+alpha-ketomalonic acid <br /> | **[[5mdh]] – pMd+NAD+alpha-ketomalonic acid <br /> | ||
| + | **[[9d2f]] – mMd in radial spoke complex – Cryo EM<br /> | ||
**[[5zi2]] – yMd + NAD + ADP - yeast<br /> | **[[5zi2]] – yMd + NAD + ADP - yeast<br /> | ||
**[[5zi4]] – yMd + NAD + oxalacetate <br /> | **[[5zi4]] – yMd + NAD + oxalacetate <br /> | ||
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**[[7by9]] – GsMd + NADH + oxalacetate – ''Geobacillus stearophilus''<br /> | **[[7by9]] – GsMd + NADH + oxalacetate – ''Geobacillus stearophilus''<br /> | ||
**[[7bya]] – GsMd + adenosine diphosphoribose + oxalacetate <br /> | **[[7bya]] – GsMd + adenosine diphosphoribose + oxalacetate <br /> | ||
| + | **[[8gi0]] – TcMd + PEX5 + PEX14 – Cryo EM<br /> | ||
| + | **[[8xku]], [[8xkv]] – AtMd in Ycf2-FtsHI motor complex – Cryo EM<br /> | ||
| + | **[[8jd5]] – AtMd in starch degradation complex – Cryo EM<br /> | ||
* apo-MDH | * apo-MDH | ||
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**[[6zne]], [[6znk]], [[6znr]] – BbMd (mutant)<br /> | **[[6zne]], [[6znk]], [[6znr]] – BbMd (mutant)<br /> | ||
**[[7aob]] – Md – ''Thermaerobacter marianensis''<br /> | **[[7aob]] – Md – ''Thermaerobacter marianensis''<br /> | ||
| - | **[[7nrz]] – | + | **[[7nrz]] – TcMd <br /> |
| + | **[[9fee]] – TcMd – Cryo EM<br /> | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
3D Structures of Malate Dehydrogenase
Updated on 10-December-2025
The holo-MDH contains NAD or its derivatives while the apo-MDH lacks it.
