8pt2

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Current revision (23:14, 27 December 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8pt2 is ON HOLD until Paper Publication
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==Tilapia Lake Virus polymerase in vRNA pre-initiation state mode B (transcriptase conformation)==
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<StructureSection load='8pt2' size='340' side='right'caption='[[8pt2]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8pt2]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Tilapia_lake_virus Tilapia lake virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8PT2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8PT2 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.59&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8pt2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8pt2 OCA], [https://pdbe.org/8pt2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8pt2 RCSB], [https://www.ebi.ac.uk/pdbsum/8pt2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8pt2 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A142I7Z3_9VIRU A0A142I7Z3_9VIRU]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Tilapia Lake Virus (TiLV), a recently discovered pathogen of tilapia fish, belongs to the Amnoonviridae family from the Articulavirales order. Its ten genome segments have characteristic conserved ends and encode proteins with no known homologues, apart from the segment 1, which encodes an orthomyxo-like RNA-dependent-RNA polymerase core subunit. Here we show that segments 1-3 encode respectively the PB1, PB2 and PA-like subunits of an active heterotrimeric polymerase that maintains all domains found in the distantly related influenza polymerase, despite an unprecedented overall size reduction of 40%. Multiple high-resolution cryo-EM structures of TiLV polymerase in pre-initiation, initiation and active elongation states, show how it binds the vRNA and cRNA promoters and performs RNA synthesis, with both transcriptase and replicase configurations being characterised. However, the highly truncated endonuclease-like domain appears inactive and the putative cap-binding domain is autoinhibited, emphasising that many functional aspects of TiLV polymerase remain to be elucidated.
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Authors: Arragain, B., Cusack, S.
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Structural and functional analysis of the minimal orthomyxovirus-like polymerase of Tilapia Lake Virus from the highly diverged Amnoonviridae family.,Arragain B, Pelosse M, Thompson A, Cusack S Nat Commun. 2023 Dec 9;14(1):8145. doi: 10.1038/s41467-023-44044-x. PMID:38066000<ref>PMID:38066000</ref>
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Description: Tilapia Lake Virus polymerase in vRNA pre-initiation state mode B (transcriptase conformation)
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Arragain, B]]
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<div class="pdbe-citations 8pt2" style="background-color:#fffaf0;"></div>
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[[Category: Cusack, S]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Tilapia lake virus]]
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[[Category: Arragain B]]
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[[Category: Cusack S]]

Current revision

Tilapia Lake Virus polymerase in vRNA pre-initiation state mode B (transcriptase conformation)

PDB ID 8pt2

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