8k41
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==mercuric reductase,GbsMerA, - FAD bound== | |
+ | <StructureSection load='8k41' size='340' side='right'caption='[[8k41]], [[Resolution|resolution]] 2.39Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[8k41]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gelidibacter_salicanalis Gelidibacter salicanalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8K41 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8K41 FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8k41 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8k41 OCA], [https://pdbe.org/8k41 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8k41 RCSB], [https://www.ebi.ac.uk/pdbsum/8k41 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8k41 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/A0A934NG65_9FLAO A0A934NG65_9FLAO] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Heavy metals, including mercury, are non-biodegradable and highly toxic to microorganisms even at low concentrations. Understanding the mechanisms underlying the environmental adaptability of microorganisms with Hg resistance holds promise for their use in Hg bioremediation. We characterized GbsMerA, a mercury reductase belonging to the mercury-resistant operon of Gelidibacter salicanalis PAMC21136, and found its maximum activity of 474.7 micromol/min/mg in reducing Hg(+2). In the presence of Ag and Mn, the enzyme exhibited moderate activity as 236.5 micromol/min/mg and 69 micromol/min/mg, respectively. GbsMerA exhibited optimal activity at pH 7.0 and a temperature of 60 degrees C. Moreover, the crystal structure of GbsMerA and structural comparison with homologues indicated that GbsMerA contains residues, Tyr437 and Asp47, which may be responsible for metal transfer at the si-face by providing a hydroxyl group (-OH) to abstract a proton from the thiol group of cysteine. The complex structure with NADPH indicated that Y174 in the re-face can change its side chain direction upon NADPH binding, indicating that Y174 may have a role as a gate for NADPH binding. Moreover, the heterologous host expressing GbsMerA (pGbsMerA) is more resistant to Hg toxicity when compared to the host lacking GbsMerA. Overall, this study provides a background for understanding the catalytic mechanism and Hg detoxification by GbsMerA and suggests the application of genetically engineered E. coli strains for environmental Hg removal. | ||
- | + | Biochemical and structural basis of mercuric reductase, GbsMerA, from Gelidibacter salicanalis PAMC21136.,Pardhe BD, Lee MJ, Lee JH, Do H, Oh TJ Sci Rep. 2023 Oct 19;13(1):17854. doi: 10.1038/s41598-023-44968-w. PMID:37857791<ref>PMID:37857791</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Do | + | <div class="pdbe-citations 8k41" style="background-color:#fffaf0;"></div> |
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Gelidibacter salicanalis]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Do H]] |
Revision as of 05:19, 15 May 2024
mercuric reductase,GbsMerA, - FAD bound
|