8kb0

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Current revision (18:03, 29 May 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8kb0 is ON HOLD until 2025-08-03
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==Crystal structure of 01JD-AEAIIVAMV==
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<StructureSection load='8kb0' size='340' side='right'caption='[[8kb0]], [[Resolution|resolution]] 2.48&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8kb0]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Anas_platyrhynchos Anas platyrhynchos] and [https://en.wikipedia.org/wiki/Unidentified_influenza_virus Unidentified influenza virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8KB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8KB0 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.48&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8kb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8kb0 OCA], [https://pdbe.org/8kb0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8kb0 RCSB], [https://www.ebi.ac.uk/pdbsum/8kb0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8kb0 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q14U75_ANAPL Q14U75_ANAPL] Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system.[SAAS:SAAS00319106]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Micropolymorphism significantly shapes the peptide-binding characteristics of major histocompatibility complex class I (MHC-I) molecules, affecting the host's resistance to pathogens, which is particularly pronounced in avian species displaying the "minimal essential MHC" expression pattern. In this study, we compared two duck MHC-I alleles, Anpl-UAA*77 and Anpl-UAA*78, that exhibit markedly different peptide binding properties despite their high sequence homology. Through mutagenesis experiments and crystallographic analysis of complexes with the influenza virus-derived peptide AEAIIVAMV (AEV9), we identified a critical role for the residue at position 62 in regulating hydrogen-bonding interactions between the peptide backbone and the peptide-binding groove. This modulation affects the characteristics of the B pocket and the stability of the loop region between the 3(10) helix and the alpha1 helix, leading to significant changes in the structure and stability of the peptide-MHC-I complex (pMHC-I). Moreover, the proportion of different residues at position 62 among Anpl-UAAs may reflect the correlation between pAnpl-UAA stability and duck body temperature. This research not only advances our understanding of the Anpl-UAA structure but also deepens our insight into the impact of MHC-I micropolymorphism on peptide binding.
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Authors: Tang, Z., Zhang, N.
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The impact of micropolymorphism in Anpl-UAA on structural stability and peptide presentation.,Tang Z, Wang S, Du L, Hu D, Chen X, Zheng H, Ding H, Chen S, Zhang L, Zhang N Int J Biol Macromol. 2024 May;267(Pt 2):131665. doi: , 10.1016/j.ijbiomac.2024.131665. Epub 2024 Apr 16. PMID:38636758<ref>PMID:38636758</ref>
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Description: Crystal structure of 01JD-AEAIIVAMV
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Zhang, N]]
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<div class="pdbe-citations 8kb0" style="background-color:#fffaf0;"></div>
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[[Category: Tang, Z]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Anas platyrhynchos]]
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[[Category: Large Structures]]
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[[Category: Unidentified influenza virus]]
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[[Category: Tang Z]]
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[[Category: Zhang N]]

Current revision

Crystal structure of 01JD-AEAIIVAMV

PDB ID 8kb0

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