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| - | [[Image:1ns3.gif|left|200px]] | + | {{Seed}} |
| | + | [[Image:1ns3.png|left|200px]] |
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| | {{STRUCTURE_1ns3| PDB=1ns3 | SCENE= }} | | {{STRUCTURE_1ns3| PDB=1ns3 | SCENE= }} |
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| - | '''STRUCTURE OF HCV PROTEASE (BK STRAIN)'''
| + | ===STRUCTURE OF HCV PROTEASE (BK STRAIN)=== |
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| - | ==Overview==
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| - | The crystal structure of the NS3 protease of the hepatitis C virus (BK strain) has been determined in the space group P6(3)22 to a resolution of 2.2 A. This protease is bound with a 14-mer peptide representing the central region of the NS4A protein. There are two molecules of the NS3(1-180)-NS4A(21'-34') complex per asymmetric unit. Each displays a familiar chymotrypsin-like fold that includes two beta-barrel domains and four short alpha-helices. The catalytic triad (Ser-139, His-57, and Asp-81) is located in the crevice between the beta-barrel domains. The NS4A peptide forms an almost completely enclosed peptide surface association with the protease. In contrast to the reported H strain complex of NS3 protease-NS4A peptide in a trigonal crystal form (Kim JL et al., 1996, Cell 87:343-355), the N-terminus of the NS3 protease is well-ordered in both molecules in the asymmetric unit of our hexagonal crystal form. The folding of the N-terminal region of the NS3 protease is due to the formation of a three-helix bundle as a result of crystal packing. When compared with the unbound structure (Love RA et al., 1996, Cell 87:331-342), the binding of the NS4A peptide leads to the ordering of the N-terminal 28 residues of the NS3 protease into a beta-strand and an alpha-helix and also causes local rearrangements important for a catalytically favorable conformation at the active site. Our analysis provides experimental support for the proposal that binding of an NS4A-mimicking peptide, which increases catalytic rates, is necessary but not sufficient for formation of a well-ordered, compact and, hence, highly active protease molecule.
| + | The line below this paragraph, {{ABSTRACT_PUBMED_9568891}}, adds the Publication Abstract to the page |
| | + | (as it appears on PubMed at http://www.pubmed.gov), where 9568891 is the PubMed ID number. |
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| | + | {{ABSTRACT_PUBMED_9568891}} |
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| | ==About this Structure== | | ==About this Structure== |
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| | [[Category: Hydrolase]] | | [[Category: Hydrolase]] |
| | [[Category: Serine proteinase]] | | [[Category: Serine proteinase]] |
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 02:54:45 2008'' | + | |
| | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 05:28:36 2008'' |
Revision as of 02:28, 28 July 2008
Template:STRUCTURE 1ns3
STRUCTURE OF HCV PROTEASE (BK STRAIN)
Template:ABSTRACT PUBMED 9568891
About this Structure
1NS3 is a Protein complex structure of sequences from Hepatitis c virus. Full crystallographic information is available from OCA.
Reference
Complex of NS3 protease and NS4A peptide of BK strain hepatitis C virus: a 2.2 A resolution structure in a hexagonal crystal form., Yan Y, Li Y, Munshi S, Sardana V, Cole JL, Sardana M, Steinkuehler C, Tomei L, De Francesco R, Kuo LC, Chen Z, Protein Sci. 1998 Apr;7(4):837-47. PMID:9568891
Page seeded by OCA on Mon Jul 28 05:28:36 2008
