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1r4m

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{{STRUCTURE_1r4m| PDB=1r4m | SCENE= }}
{{STRUCTURE_1r4m| PDB=1r4m | SCENE= }}
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'''APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex'''
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===APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex===
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==Overview==
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E1 enzymes initiate ubiquitin-like protein (ubl) transfer cascades by catalyzing adenylation of the ubl's C terminus. An E1's selectivity for its cognate ubl is essential because the E1 subsequently coordinates the ubl with its correct downstream pathway. We report here the structure of the 120 kDa quaternary complex between human APPBP1-UBA3, a heterodimeric E1, its ubl NEDD8, and ATP. The E1 selectively recruits NEDD8 through a bipartite interface, involving a domain common to all ubl activating enzymes including bacterial ancestors, and also eukaryotic E1-specific sequences. By modeling ubiquitin into the NEDD8 binding site and performing mutational analysis, we identify a single conserved arginine in APPBP1-UBA3 that acts as a selectivity gate, preventing misactivation of ubiquitin by NEDD8's E1. NEDD8 residues that interact with E1 correspond to residues in ubiquitin important for binding the proteasome and other ubiquitin-interacting proteins, suggesting that the conjugation and recognition machineries have coevolved for each specific ubl.
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(as it appears on PubMed at http://www.pubmed.gov), where 14690597 is the PubMed ID number.
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{{ABSTRACT_PUBMED_14690597}}
==About this Structure==
==About this Structure==
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[[Category: Walden, H.]]
[[Category: Walden, H.]]
[[Category: Cell cycle]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 07:04:06 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 12:15:23 2008''

Revision as of 09:15, 28 July 2008

Image:1r4m.png

Template:STRUCTURE 1r4m

APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex

Template:ABSTRACT PUBMED 14690597

About this Structure

1R4M is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.

Reference

The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1., Walden H, Podgorski MS, Huang DT, Miller DW, Howard RJ, Minor DL Jr, Holton JM, Schulman BA, Mol Cell. 2003 Dec;12(6):1427-37. PMID:14690597

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