This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1r6p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1r6p.jpg|left|200px]]
+
{{Seed}}
 +
[[Image:1r6p.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1r6p| PDB=1r6p | SCENE= }}
{{STRUCTURE_1r6p| PDB=1r6p | SCENE= }}
-
'''NMR structure of the N-terminal domain of trout cardiac troponin C at 7 C'''
+
===NMR structure of the N-terminal domain of trout cardiac troponin C at 7 C===
-
==Overview==
+
<!--
-
Adaptation for life at different temperatures can cause changes in many aspects of an organism. One example is the expression of different protein isoforms in species adapted to different temperatures. The calcium regulatory protein cardiac troponin C (cTnC), from rainbow trout (Oncorhynchus mykiss), is a good model for studying temperature effects, both because of its low physiological temperature and because mammalian cTnC, extensively studied at higher temperatures, can be used for comparison. We determined the structure and studied the backbone dynamics of the regulatory domain of trout cardiac troponin C (ScNTnC) with one Ca(2+) bound at 7 and 30 degrees C, using nuclear magnetic resonance spectroscopy (NMR). The overall fold of the regulatory domain of trout cTnC at both temperatures is similar to the regulatory domain of mammalian (human, bovine, and porcine isoform) cTnC bound to one Ca(2+). By comparing the trout structures at the two temperatures, we identify differences between the positions of the helices flanking the calcium binding loops, and the overall structure at 7 degrees C is more compact than that at 30 degrees C. The structure at 7 degrees C is more similar to the mammalian cTnC, which was determined at 30 degrees C, indicating that they have the same conformation at their respective physiological temperatures. The dynamic properties of the regulatory domain of trout cTnC are similar at the two temperatures that were used in these studies.
+
The line below this paragraph, {{ABSTRACT_PUBMED_15109253}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 15109253 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_15109253}}
==About this Structure==
==About this Structure==
-
1R6P is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Oncorhynchus_mykiss Oncorhynchus mykiss]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R6P OCA].
+
1R6P is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Oncorhynchus_mykiss Oncorhynchus mykiss]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R6P OCA].
==Reference==
==Reference==
Line 27: Line 31:
[[Category: Tibbits, G F.]]
[[Category: Tibbits, G F.]]
[[Category: Ef-hand]]
[[Category: Ef-hand]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 07:09:02 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 09:16:36 2008''

Revision as of 06:16, 28 July 2008

Image:1r6p.png

Template:STRUCTURE 1r6p

NMR structure of the N-terminal domain of trout cardiac troponin C at 7 C

Template:ABSTRACT PUBMED 15109253

About this Structure

1R6P is a Single protein structure of sequence from Oncorhynchus mykiss. Full experimental information is available from OCA.

Reference

Effect of temperature on the structure of trout troponin C., Blumenschein TM, Gillis TE, Tibbits GF, Sykes BD, Biochemistry. 2004 May 4;43(17):4955-63. PMID:15109253

Page seeded by OCA on Mon Jul 28 09:16:36 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1r6p"
Personal tools