User:Chloe Tucker/Sandbox 1

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=== Binding/Active Site of GIPR with Tirzepatide ===
=== Binding/Active Site of GIPR with Tirzepatide ===
[[Image:TZ_hydrogen_bonds.jpg|350 px|right|thumb|Figure 2. Residue Interactions with Tirzepatide]]
[[Image:TZ_hydrogen_bonds.jpg|350 px|right|thumb|Figure 2. Residue Interactions with Tirzepatide]]
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The <scene name='10/1038815/Tirzepatide_active_site/3'>binding site</scene> with Tirzepatide is the same as GIP with the N-term binding to the transmembrane domain.
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The <scene name='10/1038815/N-term_of_gip/25'>binding site</scene> with Tirzepatide is the same as GIP with the N-term binding to the transmembrane domain.
The <scene name='10/1038815/Tirzepatide_residues/5'>residues</scene> are fairly similar just in a different conformations, which is allowing for more hydrogen bonding. The more hydrogen bonding there is the stronger the binding between the two proteins will be. In Tirzepatide, the most noticeable conformational change is the Tyrosine 1 (Y1) residue. It is now facing up towards Arginine 190 (R190) where they can now form a new hydrogen bond that was not present in GIP. This can lead to the conclusion that GIPR has a higher binding affinity for Tirzepatide than GIP itself<ref name="Sun"/>.
The <scene name='10/1038815/Tirzepatide_residues/5'>residues</scene> are fairly similar just in a different conformations, which is allowing for more hydrogen bonding. The more hydrogen bonding there is the stronger the binding between the two proteins will be. In Tirzepatide, the most noticeable conformational change is the Tyrosine 1 (Y1) residue. It is now facing up towards Arginine 190 (R190) where they can now form a new hydrogen bond that was not present in GIP. This can lead to the conclusion that GIPR has a higher binding affinity for Tirzepatide than GIP itself<ref name="Sun"/>.
=== Isoleucine vs. Threonine ===
=== Isoleucine vs. Threonine ===

Revision as of 14:22, 25 April 2024

GIP and GIP-R

GIP with GIP receptor

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References

[3]

Student Contributors

  • Chloe Tucker
  • Mandy Bechman

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Chloe Tucker

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