8s00

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Current revision (08:06, 6 November 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8s00 is ON HOLD until Paper Publication
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==CpKRS complexed with lysine and an inhibitor==
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<StructureSection load='8s00' size='340' side='right'caption='[[8s00]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8s00]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cryptosporidium_parvum_Iowa Cryptosporidium parvum Iowa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8S00 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8S00 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1H4W:6-oxidanyl-~{N}-[(1-oxidanylcyclohexyl)methyl]-4-oxidanylidene-chromene-2-carboxamide'>A1H4W</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8s00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8s00 OCA], [https://pdbe.org/8s00 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8s00 RCSB], [https://www.ebi.ac.uk/pdbsum/8s00 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8s00 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q5CR27_CRYPI Q5CR27_CRYPI]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Cryptosporidiosis is a diarrheal disease caused by infection with Cryptosporidium spp. parasites and is a leading cause of death in malnourished children worldwide. The only approved treatment, nitazoxanide, has limited efficacy in this at-risk patient population. Additional safe therapeutics are urgently required to tackle this unmet medical need. However, the development of anti-cryptosporidial drugs is hindered by a lack of understanding of the optimal compound properties required to treat this gastrointestinal infection. To address this knowledge gap, a diverse set of potent lysyl-tRNA synthetase inhibitors was profiled to identify optimal physicochemical and pharmacokinetic properties required for efficacy in a chronic mouse model of infection. The results from this comprehensive study illustrated the importance of balancing solubility and permeability to achieve efficacy in vivo. Our results establish in vitro criteria for solubility and permeability that are predictive of compound efficacy in vivo to guide the optimization of anti-cryptosporidial drugs. Two compounds from chemically distinct series (DDD489 and DDD508) were identified as demonstrating superior efficacy and prioritized for further evaluation. Both compounds achieved marked parasite reduction in immunocompromised mouse models and a disease-relevant calf model of infection. On the basis of these promising data, these compounds have been selected for progression to preclinical safety studies, expanding the portfolio of potential treatments for this neglected infectious disease.
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Authors: Dawson, A., Baragana, B., Caldwell, N.
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Cryptosporidium lysyl-tRNA synthetase inhibitors define the interplay between solubility and permeability required to achieve efficacy.,Caldwell N, Peet C, Miller P, Colon BL, Taylor MG, Cocco M, Dawson A, Lukac I, Teixeira JE, Robinson L, Frame L, Seizova S, Damerow S, Tamaki F, Post J, Riley J, Mutter N, Hanna JC, Ferguson L, Hu X, Tinti M, Forte B, Norcross NR, Campbell PS, Svensen N, Caldwell FC, Jansen C, Postis V, Read KD, Huston CD, Gilbert IH, Baragana B, Pawlowic MC Sci Transl Med. 2024 Oct 23;16(770):eadm8631. doi: 10.1126/scitranslmed.adm8631. , Epub 2024 Oct 23. PMID:39441903<ref>PMID:39441903</ref>
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Description: CpKRS complexed with lysine and an inhibitor
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Baragana, B]]
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<div class="pdbe-citations 8s00" style="background-color:#fffaf0;"></div>
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[[Category: Dawson, A]]
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== References ==
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[[Category: Caldwell, N]]
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Cryptosporidium parvum Iowa]]
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[[Category: Large Structures]]
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[[Category: Baragana B]]
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[[Category: Caldwell N]]
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[[Category: Dawson A]]

Current revision

CpKRS complexed with lysine and an inhibitor

PDB ID 8s00

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