9bpc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:29, 19 March 2025) (edit) (undo)
 
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 9bpc is ON HOLD until Paper Publication
+
==Cryo-EM structure of P2X3 receptor in complex with camlipixant==
 +
<StructureSection load='9bpc' size='340' side='right'caption='[[9bpc]], [[Resolution|resolution]] 3.44&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[9bpc]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Canis_lupus Canis lupus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9BPC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9BPC FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.44&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1AQX:methyl+(2~{S})-2-[[2-[2,6-bis(fluoranyl)-4-(methylcarbamoyl)phenyl]-7-methyl-imidazo[1,2-a]pyridin-3-yl]methyl]morpholine-4-carboxylate'>A1AQX</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9bpc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9bpc OCA], [https://pdbe.org/9bpc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9bpc RCSB], [https://www.ebi.ac.uk/pdbsum/9bpc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9bpc ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A8I3S575_CANLF A0A8I3S575_CANLF] Receptor for ATP that acts as a ligand-gated ion channel.[PIRNR:PIRNR005713][RuleBase:RU000681]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
ATP-activated P2X3 receptors play a pivotal role in chronic cough, affecting more than 10% of the population. Despite the challenges posed by the highly conserved structure of P2X receptors, efforts to develop selective drugs targeting P2X3 have led to the development of camlipixant, a potent, selective P2X3 antagonist. However, the mechanisms of receptor desensitization, ion permeation, and structural basis of camlipixant binding to P2X3 remain unclear. Here, we report a cryo-EM structure of camlipixant-bound P2X3, revealing a previously undiscovered selective drug-binding site in the receptor. Our findings also demonstrate that conformational changes in the upper body domain, including the turret and camlipixant-binding pocket, play a critical role: turret opening facilitates P2X3 channel closure to a radius of 0.7 A, hindering cation transfer, whereas turret closure leads to channel opening. Structural and functional studies combined with molecular dynamics simulations provide a comprehensive understanding of camlipixant's selective inhibition of P2X3, offering a foundation for future drug development targeting this receptor.
-
Authors: Thach, T., Subramanian, R.
+
Mechanistic insights into the selective targeting of P2X3 receptor by camlipixant antagonist.,Thach T, Dhanabalan K, Nandekar PP, Stauffer S, Heisler I, Alvarado S, Snyder J, Subramanian R J Biol Chem. 2025 Jan;301(1):108109. doi: 10.1016/j.jbc.2024.108109. Epub 2024 , Dec 18. PMID:39706278<ref>PMID:39706278</ref>
-
Description: Cryo-EM structure of P2X3 receptor in complex with camlipixant
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Subramanian, R]]
+
<div class="pdbe-citations 9bpc" style="background-color:#fffaf0;"></div>
-
[[Category: Thach, T]]
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Canis lupus]]
 +
[[Category: Large Structures]]
 +
[[Category: Subramanian R]]
 +
[[Category: Thach T]]

Current revision

Cryo-EM structure of P2X3 receptor in complex with camlipixant

PDB ID 9bpc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools