9daz

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Current revision (16:12, 9 July 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9daz is ON HOLD
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==Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. Complex of fAPN with FCoV-23 RBD==
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<StructureSection load='9daz' size='340' side='right'caption='[[9daz]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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Authors: Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9daz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Feline_coronavirus Feline coronavirus] and [https://en.wikipedia.org/wiki/Felis_catus Felis catus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9DAZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9DAZ FirstGlance]. <br>
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Description: Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. Complex of fAPN with FCoV-23 RBD
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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[[Category: Veesler, D]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9daz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9daz OCA], [https://pdbe.org/9daz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9daz RCSB], [https://www.ebi.ac.uk/pdbsum/9daz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9daz ProSAT]</span></td></tr>
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[[Category: Seattle Structural Genomics Center For Infectious Disease (Ssgcid)]]
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</table>
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[[Category: Tortorici, M.A]]
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== Function ==
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[https://www.uniprot.org/uniprot/AMPN_FELCA AMPN_FELCA] Broad specificity aminopeptidase which plays a role in the final digestion of peptides generated from hydrolysis of proteins by gastric and pancreatic proteases. Also involved in the processing of various peptides including peptide hormones, such as angiotensin III and IV, neuropeptides, and chemokines. May also be involved the cleavage of peptides bound to major histocompatibility complex class II molecules of antigen presenting cells. May have a role in angiogenesis and promote cholesterol crystallization. May have a role in amino acid transport by acting as binding partner of amino acid transporter SLC6A19 and regulating its activity (By similarity).[UniProtKB:P15144][UniProtKB:P97449] (Microbial infection) In case of feline coronavirus (FCoV) infection, serves as a receptor for FCoV spike glycoprotein. It is as well a receptor for other serogroup I coronaviruses, like canine coronavirus (CCoV), porcine transmissible gastroenteritis virus (TGEV), and human coronavirus 229E (HCoV-229E). Also serves as a receptor for infectious bronchitis virus (IBV, Arkansas 99 serotype) in serogroup III.<ref>PMID:12417943</ref> <ref>PMID:8970993</ref> <ref>PMID:9634079</ref> [https://www.uniprot.org/uniprot/IGG1_HUMAN IGG1_HUMAN] Immunoglobulins, also known as antibodies, are membrane-bound or secreted glycoproteins produced by B lymphocytes. In the recognition phase of humoral immunity, the membrane-bound immunoglobulins serve as receptors which, upon binding of a specific antigen, trigger the clonal expansion and differentiation of B lymphocytes into immunoglobulins-secreting plasma cells. Secreted immunoglobulins mediate the effector phase of humoral immunity, which results in the elimination of bound antigens (PubMed:22158414, PubMed:20176268). The antigen binding site is formed by the variable domain of one heavy chain, together with that of its associated light chain. Thus, each immunoglobulin has two antigen binding sites with remarkable affinity for a particular antigen. The variable domains are assembled by a process called V-(D)-J rearrangement and can then be subjected to somatic hypermutations which, after exposure to antigen and selection, allow affinity maturation for a particular antigen (PubMed:20176268, PubMed:17576170).<ref>PMID:17576170</ref> <ref>PMID:20176268</ref> <ref>PMID:22158414</ref>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Feline coronavirus]]
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[[Category: Felis catus]]
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[[Category: Large Structures]]
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[[Category: Tortorici MA]]
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[[Category: Veesler D]]

Current revision

Molecular basis of pathogenicity of the recently emerged FCoV-23 coronavirus. Complex of fAPN with FCoV-23 RBD

PDB ID 9daz

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