9g8p
From Proteopedia
(Difference between revisions)
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- | '''Unreleased structure''' | ||
- | + | ==40S-bound human SKI2-exosome complex== | |
- | + | <StructureSection load='9g8p' size='340' side='right'caption='[[9g8p]], [[Resolution|resolution]] 7.00Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[9g8p]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Cricket_paralysis_virus Cricket paralysis virus] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9G8P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9G8P FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 7Å</td></tr> | |
- | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9g8p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9g8p OCA], [https://pdbe.org/9g8p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9g8p RCSB], [https://www.ebi.ac.uk/pdbsum/9g8p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9g8p ProSAT]</span></td></tr> |
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/EXOS8_HUMAN EXOS8_HUMAN] Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. EXOSC8 binds to ARE-containing RNAs.<ref>PMID:16912217</ref> <ref>PMID:17545563</ref> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Cricket paralysis virus]] | ||
+ | [[Category: Homo sapiens]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Conti E]] | ||
+ | [[Category: Keidel A]] | ||
+ | [[Category: Koegel A]] | ||
+ | [[Category: Kuhn CC]] | ||
+ | [[Category: Langer LM]] | ||
+ | [[Category: Loukeri MJ]] | ||
+ | [[Category: Schaefer IB]] |
Current revision
40S-bound human SKI2-exosome complex
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