9jjb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:42, 6 August 2025) (edit) (undo)
 
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 9jjb is ON HOLD until Paper Publication
+
==Class 1 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain==
-
 
+
<StructureSection load='9jjb' size='340' side='right'caption='[[9jjb]], [[Resolution|resolution]] 2.68&Aring;' scene=''>
-
Authors:
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[9jjb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_graminofaciens Streptomyces graminofaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9JJB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9JJB FirstGlance]. <br>
-
Description:
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.68&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=9EF:[(3~{R})-4-[[3-(2-acetamidoethylamino)-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl]+dihydrogen+phosphate'>9EF</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9jjb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9jjb OCA], [https://pdbe.org/9jjb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9jjb RCSB], [https://www.ebi.ac.uk/pdbsum/9jjb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9jjb ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GFSA_STRHA GFSA_STRHA] First protein in the synthesis of the 16-membered macrolide antibiotics FD-891 and FD-892 (PubMed:20589823). Composed of 5 modules; the first is a loading module (LM) that synthesizes a starter unit used by the first elongation module for polyketide chain elongation (PubMed:34985877, PubMed:37216195). The starter unit is extended by multiple rounds of addition of malonyl-CoA or methylmalonyl-CoA, and other modifications to help generate the final products (Probable) (PubMed:20589823). The loading module (residues 1-927, LM with an inactive acyltransferase domain) preferentially decarboxylates malonyl-GfsA acyl carrier protein of the LM (ACP-LM) over methylmalonyl-GfsA ACP-LM and has no activity on malonyl-CoA or methymalonyl-CoA (PubMed:34985877). LM decarboxylates malonyl-ACP-LM better than the malonyl-ACP-1 module of GfsA (i.e. the next module in the same protein) and has no activity on other malonyl-ACP modules (PubMed:37216195).<ref>PMID:20589823</ref> <ref>PMID:34985877</ref> <ref>PMID:37216195</ref> <ref>PMID:20589823</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Streptomyces graminofaciens]]
 +
[[Category: Adachi N]]
 +
[[Category: Chisuga T]]
 +
[[Category: Eguchi T]]
 +
[[Category: Kawasaki M]]
 +
[[Category: Kudo F]]
 +
[[Category: Liao Z]]
 +
[[Category: Miyanaga A]]
 +
[[Category: Moriya T]]
 +
[[Category: Senda T]]

Current revision

Class 1 state of the GfsA KSQ-ancestralAT chimeric didomain in complex with the GfsA ACP domain

PDB ID 9jjb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools