Sandbox new animation test
From Proteopedia
(Difference between revisions)
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</jmol> | </jmol> | ||
+ | |||
+ | == new try == | ||
+ | |||
+ | |||
+ | <StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''> | ||
+ | This is a default text for your page '''Sandbox new animation test'''. Click above on '''edit this page''' to modify. Be careful with the < and > signs. | ||
+ | You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | ||
+ | |||
+ | == Function == | ||
+ | |||
+ | |||
+ | |||
+ | Superposition of the monomer of TLR2<sup>TIR</sup> induced MyD88<sup>TIR</sup> structure [[8s78]] (blue) with the MyD88<sup>TIR</sup> X-ray structure [[4e07]] yellow) <jmol> | ||
+ | <jmolButton> | ||
+ | <text>Superposition</text> | ||
+ | <script> | ||
+ | script /wiki/scripts/10/1056692/Fig_07c_01/5.spt; delay .1; script /wiki/scripts/10/1056692/Fig_07c_01/5.spt; | ||
+ | </script> | ||
+ | </jmolButton> | ||
+ | </jmol> <jmol> | ||
+ | <jmolButton> | ||
+ | <text>Animation</text> | ||
+ | <script> | ||
+ | var a = [1]; | ||
+ | for(var i IN a) { | ||
+ | script /wiki/scripts/10/1056692/Fig_07c_animate/5.spt; delay .5; | ||
+ | } | ||
+ | </script> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | |||
+ | Superpostion of the monomer of TLR2<sup>TIR</sup> induced MyD88<sup>TIR</sup> structure [[8s78]] (blue) on the MyD88<sup>TIR</sup> NMR structure [[2z5v]] orange) <jmol> | ||
+ | <jmolButton> | ||
+ | <text>Superposition</text> | ||
+ | <script> | ||
+ | script /wiki/scripts/10/1056692/Fig_7d_superposition/3.spt; delay .1; script /wiki/scripts/10/1056692/Fig_7d_superposition/3.spt; | ||
+ | </script> | ||
+ | </jmolButton> | ||
+ | </jmol> <jmol> | ||
+ | <jmolButton> | ||
+ | <text>Animation</text> | ||
+ | <script> | ||
+ | var a = [1]; | ||
+ | for(var i IN a) { | ||
+ | script /wiki/scripts/10/1056692/Fig_7d_animation/1.spt; delay .5; | ||
+ | } | ||
+ | </script> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
Revision as of 06:57, 24 October 2024
Your Heading Here (maybe something like 'Structure')
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644