We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.
9gdp
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Cryo-EM structure of Vibrio cholerae RNA polymerase holoenzyme bound to an ompU promoter DNA fragment and 5-mer RNA== | |
| - | + | <StructureSection load='9gdp' size='340' side='right'caption='[[9gdp]], [[Resolution|resolution]] 2.60Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[9gdp]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O395 Vibrio cholerae O395]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9GDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9GDP FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.6Å</td></tr> | |
| - | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9gdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9gdp OCA], [https://pdbe.org/9gdp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9gdp RCSB], [https://www.ebi.ac.uk/pdbsum/9gdp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9gdp ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RPOB_VIBC3 RPOB_VIBC3] DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.[HAMAP-Rule:MF_01321] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Vibrio cholerae O395]] | ||
| + | [[Category: Alcaide-Jimenez A]] | ||
| + | [[Category: Bantysh O]] | ||
| + | [[Category: Baudin F]] | ||
| + | [[Category: Canals A]] | ||
| + | [[Category: Coll M]] | ||
| + | [[Category: Fabrega-Ferrer M]] | ||
| + | [[Category: Krukonis ES]] | ||
| + | [[Category: Machon C]] | ||
| + | [[Category: Muller CW]] | ||
| + | [[Category: Murciano B]] | ||
| + | [[Category: Perez-Luque R]] | ||
Current revision
Cryo-EM structure of Vibrio cholerae RNA polymerase holoenzyme bound to an ompU promoter DNA fragment and 5-mer RNA
| |||||||||||
