Converting AlphaFold3 CIF to PDB
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | The [https://alphafoldserver.com AlphaFold3 Server] predicts models only in the [[Mmcif format|mmCIF format]] (filename ending '''.cif'''). | + | The [https://alphafoldserver.com AlphaFold3 Server] predicts models only in the [[Mmcif format|mmCIF format]] (filename ending '''.cif'''). These files can be uploaded to [[iCn3D]], or displayed in [[PyMOL]] or [[ChimeraX]]. |
| - | In 2024, [http://firstglance.jmol.org FirstGlance in Jmol] requires the older [[PDB format]]. | + | In 2024, [http://firstglance.jmol.org FirstGlance in Jmol] requires the older [[PDB format]]. If you wish to display AlphaFold3 predicted structures in FirstGlance, here is how to convert them to PDB format: |
| + | # | ||
Revision as of 01:58, 11 November 2024
The AlphaFold3 Server predicts models only in the mmCIF format (filename ending .cif). These files can be uploaded to iCn3D, or displayed in PyMOL or ChimeraX.
In 2024, FirstGlance in Jmol requires the older PDB format. If you wish to display AlphaFold3 predicted structures in FirstGlance, here is how to convert them to PDB format:
