Proteopedia:Macros
From Proteopedia
(Difference between revisions)
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** <u>example:</u> peekaboo({998}); peekaboo('ACH'); | ** <u>example:</u> peekaboo({998}); peekaboo('ACH'); | ||
| - | *<b>putty(selection)</b> <i>colors protein trace according to B-factor</i> | + | *<b>putty(selection,scheme)</b> <i>colors protein trace according to B-factor and applies trace thickness proportional to B-factor value</i> |
** param <u>selection</u> what portion to color | ** param <u>selection</u> what portion to color | ||
| + | ** optional param <u>scheme</u>, if it is "wr" colors using gradient from white (low B) to red (high B); if absent or any other value, colors using the standard blue-white-red gradient (low to high B) | ||
** <u>import</u> script /mc/aherraez.spt | ** <u>import</u> script /mc/aherraez.spt | ||
| - | ** <u>example</u> putty( {protein} ); putty( {*:A}, "wr" ); putty( {*:B} | + | ** <u>example</u> putty( {protein} ); putty( {*:A}, "wr" ); putty( {*:B} ); |
*<b>wobble()</b> | *<b>wobble()</b> | ||
Current revision
- blink(ligand)
- import: script /mc/ktheis.spt;
- bobble()
- import: script /mc/ktheis.spt;
- peekaboo(ligand) hides ligand for 0.5 seconds by Karsten Theis
- param ligand: what to hide/show
- import: script /mc/ktheis.spt;
- example: peekaboo({998}); peekaboo('ACH');
- putty(selection,scheme) colors protein trace according to B-factor and applies trace thickness proportional to B-factor value
- param selection what portion to color
- optional param scheme, if it is "wr" colors using gradient from white (low B) to red (high B); if absent or any other value, colors using the standard blue-white-red gradient (low to high B)
- import script /mc/aherraez.spt
- example putty( {protein} ); putty( {*:A}, "wr" ); putty( {*:B} );
- wobble()
- import: script /mc/ktheis.spt;
For more about Macros and how to use them, see Proteopedia:DIY:Macros.
