9q2r

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Current revision (06:32, 26 November 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9q2r is ON HOLD until Paper Publication
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==ADP-bound structure of PmtCD in peptidisc==
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<StructureSection load='9q2r' size='340' side='right'caption='[[9q2r]], [[Resolution|resolution]] 4.20&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9q2r]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9Q2R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9Q2R FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9q2r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9q2r OCA], [https://pdbe.org/9q2r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9q2r RCSB], [https://www.ebi.ac.uk/pdbsum/9q2r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9q2r ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A641A693_STAAU A0A641A693_STAAU]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Staphylococci secrete amphipathic peptides known as phenol soluble modulins (PSMs) that play a variety of pathogenic roles including host cell membrane destruction, biofilm development, and the triggering of inflammatory responses. PSM export is facilitated by the essential ATP-binding cassette (ABC) transporter PmtCD, which also provides producer immunity toward the membrane-damaging PSMs. Here, we report cryo-EM structures of PmtCD in a nucleotide-free state using different membrane mimetics - detergent, nanodisc and peptidisc - all featuring the transmembrane domains in an open state with a remarkably expansive intervening lumen. The consistently sized lumen suggests the possibility for two alpha-helical amphipathic PSMs to pack and passage within. A continuous hydrophobic surface with no apparent single high affinity site is in keeping with the ability of PmtCD to export a variety of hydrophobic PSM peptide substrates. The ATP driven collapse of the PmtD lumen is consistent with the lateral access and extrusion mechanisms of related ABC transporters that translocate membrane embedded substrates. Along with a new ADP product complex and prior ATPgammaS-bound form, these structures provide insights into the export of PSMs and a foundation for design of trojan horse antimicrobials that target MRSA strains from within by blocking membranolytic PSM export.
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Authors:
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Cryo-EM analysis of the Staphylococcus aureus phenol-soluble modulin exporter PmtCD apo form in detergent micelles, nanodiscs and peptidiscs.,Hu J, Lazarski AC, Li FKK, Worrall LJ, Burgin DJ, Zeytuni N, Dickey SW, Otto M, Strynadka NCJ Commun Biol. 2025 Nov 17;8(1):1576. doi: 10.1038/s42003-025-08955-3. PMID:41249510<ref>PMID:41249510</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 9q2r" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Staphylococcus aureus]]
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[[Category: Hu J]]
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[[Category: Lazarski AC]]
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[[Category: Li FKK]]
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[[Category: Strynadka NCJ]]
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[[Category: Worrall LJ]]

Current revision

ADP-bound structure of PmtCD in peptidisc

PDB ID 9q2r

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