9pz5

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Current revision (19:29, 4 December 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9pz5 is ON HOLD until Paper Publication
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==Native anti-NANP Fab==
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<StructureSection load='9pz5' size='340' side='right'caption='[[9pz5]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9pz5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9PZ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9PZ5 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9pz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9pz5 OCA], [https://pdbe.org/9pz5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9pz5 RCSB], [https://www.ebi.ac.uk/pdbsum/9pz5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9pz5 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Monoclonal antibodies with lambda (lambda) light chains are less commonly used in therapeutics due to their lower biophysical stability compared to kappa (kappa) variants. Here, we identify a conserved glycine residue (Gly111) in the lambda light chain hinge as a driver of large-scale Fab elbow-angle transitions. Using microsecond-scale molecular dynamics simulations of the EBV-neutralizing Fab AMMO1, we show that substituting Gly111 with threonine (G111T) increases the free energy barrier between conformational states, effectively arresting these transitions. Structural and biophysical analyses-including crystallography, differential scanning fluorimetry, and surface plasmon resonance-confirm that the mutation maintains Fab architecture and antigen binding while increasing thermal stability by up to 2.5 degrees C. The same mutation applied to a second lambda-Fab yielded similar stabilization, and simulations of three clinical lambda-Fabs revealed consistent reductions in elbow-angle flexibility. These results demonstrate a generalizable, single-residue engineering strategy to enhance the stability of lambda-based Fabs without compromising function, with direct implications for therapeutic antibody development and manufacturability.
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Authors: Young, T.
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Single-residue engineering of lambda (lambda) antibody light chains reduces conformational flexibility and enhances thermal stability.,Jewel Y, Young T, Park M, Ly K, Gonzalez A, Mallett TC, Williams JC Comput Struct Biotechnol J. 2025 Oct 24;27:4730-4739. doi: , 10.1016/j.csbj.2025.10.045. eCollection 2025. PMID:41245890<ref>PMID:41245890</ref>
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Description: Native anti-NANP Fab
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Young, T]]
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<div class="pdbe-citations 9pz5" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Young T]]

Current revision

Native anti-NANP Fab

PDB ID 9pz5

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