This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ynu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1ynu.gif|left|200px]]
+
{{Seed}}
 +
[[Image:1ynu.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1ynu| PDB=1ynu | SCENE= }}
{{STRUCTURE_1ynu| PDB=1ynu | SCENE= }}
-
'''Crystal structure of apple ACC synthase in complex with L-vinylglycine'''
+
===Crystal structure of apple ACC synthase in complex with L-vinylglycine===
-
==Overview==
+
<!--
-
L-Vinylglycine (L-VG) is both a substrate for and a mechanism-based inhibitor of 1-aminocyclopropane-1-carboxylate (ACC) synthase. The ratio of the rate constants for catalytic conversion to alpha-ketobutyrate and ammonia to inactivation is 500/1. The crystal structure of the covalent adduct of the inactivated enzyme was determined at 2.25 Angstroms resolution. The active site contains an external aldimine of the adduct of L-VG with the pyridoxal 5'-phosphate cofactor. The side chain gamma-carbon of L-VG is covalently bound to the epsilon-amino group of Lys273. This species corresponds to one of the two alternatives proposed by Feng and Kirsch [Feng, L. and Kirsch, J.F. (2000) L-Vinylglycine is an alternative substrate as well as a mechanism-based inhibitor of 1-aminocyclopropane-1-carboxylate synthase. Biochemistry 39, 2436-2444] and presumably results from Michael addition to a vinylglycine ketimine intermediate.
+
The line below this paragraph, {{ABSTRACT_PUBMED_15848188}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 15848188 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_15848188}}
==About this Structure==
==About this Structure==
Line 29: Line 33:
[[Category: Tschopp, M.]]
[[Category: Tschopp, M.]]
[[Category: Lyase]]
[[Category: Lyase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 16:33:35 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 16:21:56 2008''

Revision as of 13:21, 28 July 2008

Template:STRUCTURE 1ynu

Crystal structure of apple ACC synthase in complex with L-vinylglycine

Template:ABSTRACT PUBMED 15848188

About this Structure

1YNU is a Single protein structure of sequence from Malus x domestica. Full crystallographic information is available from OCA.

Reference

Structure of ACC synthase inactivated by the mechanism-based inhibitor L-vinylglycine., Capitani G, Tschopp M, Eliot AC, Kirsch JF, Grutter MG, FEBS Lett. 2005 Apr 25;579(11):2458-62. PMID:15848188

Page seeded by OCA on Mon Jul 28 16:21:56 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools