This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2df4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:2df4.gif|left|200px]]
+
{{Seed}}
 +
[[Image:2df4.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_2df4| PDB=2df4 | SCENE= }}
{{STRUCTURE_2df4| PDB=2df4 | SCENE= }}
-
'''Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Mn2+'''
+
===Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Mn2+===
-
==Overview==
+
<!--
-
The formation of glutaminyl transfer RNA (Gln-tRNA(Gln)) differs among the three domains of life. Most bacteria employ an indirect pathway to produce Gln-tRNA(Gln) by a heterotrimeric glutamine amidotransferase CAB (GatCAB) that acts on the misacylated Glu-tRNA(Gln). Here, we describe a series of crystal structures of intact GatCAB from Staphylococcus aureus in the apo form and in the complexes with glutamine, asparagine, Mn2+, and adenosine triphosphate analog. Two identified catalytic centers for the glutaminase and transamidase reactions are markedly distant but connected by a hydrophilic ammonia channel 30 A in length. Further, we show that the first U-A base pair in the acceptor stem and the D loop of tRNA(Gln) serve as identity elements essential for discrimination by GatCAB and propose a complete model for the overall concerted reactions to synthesize Gln-tRNA(Gln).
+
The line below this paragraph, {{ABSTRACT_PUBMED_16809541}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 16809541 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_16809541}}
==About this Structure==
==About this Structure==
Line 26: Line 30:
[[Category: Yao, M.]]
[[Category: Yao, M.]]
[[Category: Multi protein complex]]
[[Category: Multi protein complex]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 00:18:21 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 07:14:49 2008''

Revision as of 04:14, 28 July 2008

Image:2df4.png

Template:STRUCTURE 2df4

Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Mn2+

Template:ABSTRACT PUBMED 16809541

About this Structure

2DF4 is a Protein complex structure of sequences from Staphylococcus aureus. Full crystallographic information is available from OCA.

Reference

Ammonia channel couples glutaminase with transamidase reactions in GatCAB., Nakamura A, Yao M, Chimnaronk S, Sakai N, Tanaka I, Science. 2006 Jun 30;312(5782):1954-8. PMID:16809541

Page seeded by OCA on Mon Jul 28 07:14:49 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2df4"
Personal tools