This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2f40

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:2f40.gif|left|200px]]
+
{{Seed}}
 +
[[Image:2f40.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_2f40| PDB=2f40 | SCENE= }}
{{STRUCTURE_2f40| PDB=2f40 | SCENE= }}
-
'''Structure of a Novel Protein from Backbone-Centered NMR Data and NMR-Assisted Structure Prediction'''
+
===Structure of a Novel Protein from Backbone-Centered NMR Data and NMR-Assisted Structure Prediction===
-
==Overview==
+
<!--
-
Targeting of proteins for structure determination in structural genomic programs often includes the use of threading and fold recognition methods to exclude proteins belonging to well-populated fold families, but such methods can still fail to recognize preexisting folds. The authors illustrate here a method in which limited amounts of structural data are used to improve an initial homology search and the data are subsequently used to produce a structure by data-constrained refinement of an identified structural template. The data used are primarily NMR-based residual dipolar couplings, but they also include additional chemical shift and backbone-nuclear Overhauser effect data. Using this methodology, a backbone structure was efficiently produced for a 10 kDa protein (PF1455) from Pyrococcus furiosus. Its relationship to existing structures and its probable function are discussed.
+
The line below this paragraph, {{ABSTRACT_PUBMED_16927360}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 16927360 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_16927360}}
==About this Structure==
==About this Structure==
-
2F40 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F40 OCA].
+
2F40 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F40 OCA].
==Reference==
==Reference==
Line 34: Line 38:
[[Category: Southeast collaboratory for structural genomic]]
[[Category: Southeast collaboratory for structural genomic]]
[[Category: Structural genomic]]
[[Category: Structural genomic]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 03:26:16 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 15:43:16 2008''

Revision as of 12:43, 27 July 2008

Image:2f40.png

Template:STRUCTURE 2f40

Structure of a Novel Protein from Backbone-Centered NMR Data and NMR-Assisted Structure Prediction

Template:ABSTRACT PUBMED 16927360

About this Structure

2F40 is a Single protein structure of sequence from Pyrococcus furiosus. Full experimental information is available from OCA.

Reference

Structure determination of a new protein from backbone-centered NMR data and NMR-assisted structure prediction., Mayer KL, Qu Y, Bansal S, LeBlond PD, Jenney FE Jr, Brereton PS, Adams MW, Xu Y, Prestegard JH, Proteins. 2006 Nov 1;65(2):480-9. PMID:16927360

Page seeded by OCA on Sun Jul 27 15:43:16 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2f40"
Personal tools