2fff

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[[Image:2fff.gif|left|200px]]
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{{Seed}}
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[[Image:2fff.png|left|200px]]
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{{STRUCTURE_2fff| PDB=2fff | SCENE= }}
{{STRUCTURE_2fff| PDB=2fff | SCENE= }}
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'''Open Form of a Class A Transpeptidase Domain'''
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===Open Form of a Class A Transpeptidase Domain===
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==Overview==
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The class A PBP1b from Streptococcus pneumoniae is responsible for glycosyltransferase and transpeptidase (TP) reactions, forming the peptidoglycan of the bacterial cell wall. The enzyme has been produced in a stable, soluble form and undergoes time-dependent proteolysis to leave an intact TP domain. Crystals of this TP domain were obtained, diffracting to 2.2 A resolution, and the structure was solved by using molecular replacement. Analysis of the structure revealed an "open" active site, with important conformational differences to the previously determined "closed" apoenzyme. The active-site nucleophile, Ser460, is in an orientation that allows for acylation by beta-lactams. Consistent with the productive conformation of the conserved active-site catalytic residues, adjacent loops show only minor deviation from those of known acyl-enzyme structures. These findings are discussed in the context of enzyme functionality and the possible conformational sampling of PBP1b between active and inactive states.
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The line below this paragraph, {{ABSTRACT_PUBMED_16751607}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 16751607 is the PubMed ID number.
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{{ABSTRACT_PUBMED_16751607}}
==About this Structure==
==About this Structure==
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[[Category: Strynadka, N C.J.]]
[[Category: Strynadka, N C.J.]]
[[Category: Transpeptidase fold]]
[[Category: Transpeptidase fold]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 03:49:51 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 01:17:12 2008''

Revision as of 22:17, 28 July 2008

Image:2fff.png

Template:STRUCTURE 2fff

Open Form of a Class A Transpeptidase Domain

Template:ABSTRACT PUBMED 16751607

About this Structure

2FFF is a Protein complex structure of sequences from Streptococcus pneumoniae. Full crystallographic information is available from OCA.

Reference

Structural analysis of an "open" form of PBP1B from Streptococcus pneumoniae., Lovering AL, De Castro L, Lim D, Strynadka NC, Protein Sci. 2006 Jul;15(7):1701-9. Epub 2006 Jun 2. PMID:16751607

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