2jq8
From Proteopedia
(New page: 200px<br /> <applet load="2jq8" size="450" color="white" frame="true" align="right" spinBox="true" caption="2jq8" /> '''Solution structure of the Somatomedin B dom...) |
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'''Solution structure of the Somatomedin B domain from vitronectin produced in Pichia pastoris'''<br /> | '''Solution structure of the Somatomedin B domain from vitronectin produced in Pichia pastoris'''<br /> | ||
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==About this Structure== | ==About this Structure== | ||
| - | 2JQ8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http:// | + | 2JQ8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JQ8 OCA]. |
==Reference== | ==Reference== | ||
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[[Category: vitronectin]] | [[Category: vitronectin]] | ||
| - | ''Page seeded by [http:// | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 13:39:23 2008'' |
Revision as of 11:39, 23 January 2008
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Solution structure of the Somatomedin B domain from vitronectin produced in Pichia pastoris
Overview
The cysteine-rich somatomedin B domain (SMB) of the matrix protein, vitronectin is involved in several important biological processes. First, it stabilizes the active conformation of the plasminogen activator, inhibitor (PAI-1); second, it provides the recognition motif for cell, adhesion via the cognate integrins (alpha(v)beta(3), alpha(v)beta(5), and, alpha(IIb)beta(3)); and third, it binds the complex between urokinase-type, plasminogen activator (uPA) and its glycolipid-anchored receptor (uPAR)., Previous structural studies on SMB have used recombinant protein expressed, in Escherichia coli or SMB released from plasma-derived vitronectin by, CNBr cleavage. However, different disulfide patterns and three-dimensional, structures for SMB were reported. In the present study, we have expressed, recombinant human SMB by two different eukaryotic expression systems, Pichia pastoris and Drosophila melanogaster S2-cells, both yielding, structurally and functionally homogeneous protein preparations., Importantly, the entire population of our purified, recombinant SMB has a, solvent exposure, both as a free domain and in complex with PAI-1, which, is indistinguishable from that of plasma-derived SMB as assessed by amide, hydrogen ((1)H/(2)H) exchange. This solvent exposure was only reproduced, by one of three synthetic SMB products with predefined disulfide, connectivities corresponding to those published previously. Furthermore, this connectivity was also the only one to yield a folded and functional, domain. The NMR structure was determined for free SMB produced by Pichia, and is largely consistent with that solved by X-ray crystallography for, SMB in complex with PAI-1.
About this Structure
2JQ8 is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.
Reference
Solution structure of recombinant somatomedin B domain from vitronectin produced in Pichia pastoris., Kjaergaard M, Gardsvoll H, Hirschberg D, Nielbo S, Mayasundari A, Peterson CB, Jansson A, Jorgensen TJ, Poulsen FM, Ploug M, Protein Sci. 2007 Sep;16(9):1934-45. PMID:17766387
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