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2fr9

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{{STRUCTURE_2fr9| PDB=2fr9 | SCENE= }}
{{STRUCTURE_2fr9| PDB=2fr9 | SCENE= }}
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'''NMR structure of the alpha-conotoxin GI (SER12)-benzoylphenylalanine derivative'''
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===NMR structure of the alpha-conotoxin GI (SER12)-benzoylphenylalanine derivative===
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==Overview==
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alpha-Conotoxins are small peptides from cone snail venoms that function as nicotinic acetylcholine receptor (nAChR)-competitive antagonists differentiating between nAChR subtypes. Current understanding about the mechanism of these selective interactions is based largely on mutational analyses, which identify amino acids in the toxin and nAChR that determine the energetics of ligand binding. To identify regions of the nAChR involved in alpha-conotoxin binding by use of photoactivated cross-linking, two benzoylphenylalanine (Bpa) analogs of alpha-conotoxin GI, GI(Bpa12) and GI(Bpa4), were synthesized by replacing the respective residues with Bpa, and their (1)H-NMR structures were determined. Both analogs preserved the GI conformation, but only GI(Bpa12) displaced (125)I-labeled GI from the Torpedo californica nAChR. (125)I-labeled GI(Bpa12) bound to two sites on the receptor (K(d) 13 and 1800 nM), and on UV irradiation specifically photolabeled the alpha, gamma and delta subunits. Photolabeling sites were mapped by selective proteolysis and enzymatic deglycosylation, combined with SDS/PAGE, HPLC and Edman degradation. In the alpha subunit, cobratoxin-inhibited incorporation was limited to the 22-kDa fragment beginning at alphaSer173 and containing the agonist-binding site segment C. In the gamma subunit, radioactivity was localized to two distinct peptides containing agonist-binding site segments F and D: nonglycosylated 24-kDa and glycosylated 13-kDa fragments starting at gammaAla167 and gammaAla49, respectively. The labeling of these fragments is discussed in terms of a model of GI(Bpa12) bound to the extracellular domain of the Torpedo nAChR homology model derived from the cryo-electron microscopy structure of Torpedo marmorata nAChR and X-ray crystal structures of snail acetylcholine-binding protein complexes with agonists and antagonists.
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(as it appears on PubMed at http://www.pubmed.gov), where 16689926 is the PubMed ID number.
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{{ABSTRACT_PUBMED_16689926}}
==About this Structure==
==About this Structure==
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2FR9 is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FR9 OCA].
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2FR9 is a [[Single protein]] structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FR9 OCA].
==Reference==
==Reference==
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[[Category: Benzophenone analog]]
[[Category: Benzophenone analog]]
[[Category: Nicotinic acetylcholine receptor antagonist]]
[[Category: Nicotinic acetylcholine receptor antagonist]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 04:13:16 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 00:23:47 2008''

Revision as of 21:23, 27 July 2008

Image:2fr9.png

Template:STRUCTURE 2fr9

NMR structure of the alpha-conotoxin GI (SER12)-benzoylphenylalanine derivative

Template:ABSTRACT PUBMED 16689926

About this Structure

2FR9 is a Single protein structure. Full experimental information is available from OCA.

Reference

alpha-Conotoxin GI benzoylphenylalanine derivatives. (1)H-NMR structures and photoaffinity labeling of the Torpedo californica nicotinic acetylcholine receptor., Kasheverov IE, Chiara DC, Zhmak MN, Maslennikov IV, Pashkov VS, Arseniev AS, Utkin YN, Cohen JB, Tsetlin VI, FEBS J. 2006 Apr;273(7):1373-88. PMID:16689926

Page seeded by OCA on Mon Jul 28 00:23:47 2008

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