We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

2fxv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:2fxv.gif|left|200px]]
+
{{Seed}}
 +
[[Image:2fxv.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_2fxv| PDB=2fxv | SCENE= }}
{{STRUCTURE_2fxv| PDB=2fxv | SCENE= }}
-
'''Bacillus subtilis Xanthine Phosphoribosyltransferase in Complex with Guanosine 5'-monophosphate (GMP)'''
+
===Bacillus subtilis Xanthine Phosphoribosyltransferase in Complex with Guanosine 5'-monophosphate (GMP)===
-
==Overview==
+
<!--
-
Xanthine phosphoribosyltransferase (XPRTase) from Bacillus subtilis is a representative of the highly xanthine specific XPRTases found in Gram-positive bacteria. These XPRTases constitute a distinct subclass of 6-oxopurine PRTases, which deviate strongly from the major class of H(X)GPRTases with respect to sequence, PRPP binding motif, and oligomeric structure. They are more related with the PurR repressor of Gram-positive bacteria, the adenine PRTase, and orotate PRTase. The catalytic function and high specificity for xanthine of B. subtilis XPRTase were investigated by ligand binding studies and reaction kinetics as a function of pH with xanthine, hypoxanthine, and guanine as substrates. The crystal structure of the dimeric XPRTase-GMP complex was determined to 2.05 A resolution. In a sequential reaction mechanism XPRTase binds first PRPP, stabilizing its active dimeric form, and subsequently xanthine. The XPRTase is able also to react with guanine and hypoxanthine albeit at much lower (10(-)(4)-fold) catalytic efficiency. Different pK(a) values for the bases and variations in their electrostatic potential can account for these catalytic differences. The unique base specificity of XPRTase has been related to a few key residues in the active site. Asn27 can in different orientations form hydrogen bonds to an amino group or an oxo group at the 2-position of the purine base, and Lys156 is positioned to make a hydrogen bond with N7. This and the absence of a catalytic carboxylate group near the N7-position require the purine base to dissociate a proton spontaneously in order to undergo catalysis.
+
The line below this paragraph, {{ABSTRACT_PUBMED_16716072}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 16716072 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_16716072}}
==About this Structure==
==About this Structure==
Line 30: Line 34:
[[Category: Gmp complex]]
[[Category: Gmp complex]]
[[Category: Type 1 phosphoribosyltransferase]]
[[Category: Type 1 phosphoribosyltransferase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 04:25:56 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 17:33:36 2008''

Revision as of 14:33, 28 July 2008

Image:2fxv.png

Template:STRUCTURE 2fxv

Bacillus subtilis Xanthine Phosphoribosyltransferase in Complex with Guanosine 5'-monophosphate (GMP)

Template:ABSTRACT PUBMED 16716072

About this Structure

2FXV is a Single protein structure of sequence from Bacillus subtilis. Full crystallographic information is available from OCA.

Reference

The extraordinary specificity of xanthine phosphoribosyltransferase from Bacillus subtilis elucidated by reaction kinetics, ligand binding, and crystallography., Arent S, Kadziola A, Larsen S, Neuhard J, Jensen KF, Biochemistry. 2006 May 30;45(21):6615-27. PMID:16716072

Page seeded by OCA on Mon Jul 28 17:33:36 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2fxv"
Personal tools