2g3m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:2g3m.gif|left|200px]]
+
{{Seed}}
 +
[[Image:2g3m.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_2g3m| PDB=2g3m | SCENE= }}
{{STRUCTURE_2g3m| PDB=2g3m | SCENE= }}
-
'''Crystal structure of the Sulfolobus solfataricus alpha-glucosidase MalA'''
+
===Crystal structure of the Sulfolobus solfataricus alpha-glucosidase MalA===
-
==Overview==
+
<!--
-
The crystal structure of alpha-glucosidase MalA from Sulfolobus solfataricus has been determined at 2.5Angstrom resolution. It provides a structural model for enzymes representing the major specificity in glycoside hydrolase family 31 (GH31), including alpha-glucosidases from higher organisms, involved in glycogen degradation and glycoprotein processing. The structure of MalA shows clear differences from the only other structure known from GH31, alpha-xylosidase YicI. MalA and YicI share only 23% sequence identity. Although the two enzymes display a similar domain structure and both form hexamers, their structures differ significantly in quaternary organization: MalA is a dimer of trimers, YicI a trimer of dimers. MalA and YicI also differ in their substrate specificities, as shown by kinetic measurements on model chromogenic substrates. In addition, MalA has a clear preference for maltose (Glc-alpha1,4-Glc), whereas YicI prefers isoprimeverose (Xyl-alpha1,6-Glc). The structural origin of this difference occurs in the -1 subsite where MalA residues Asp251 and Trp284 could interact with OH6 of the substrate. The structure of MalA in complex with beta-octyl-glucopyranoside has been determined. It reveals Arg400, Asp87, Trp284, Met321 and Phe327 as invariant residues forming the +1 subsite in the GH31 alpha-glucosidases. Structural comparisons with other GH families suggest that the GH31 enzymes belong to clan GH-D.
+
The line below this paragraph, {{ABSTRACT_PUBMED_16580018}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 16580018 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_16580018}}
==About this Structure==
==About this Structure==
Line 34: Line 38:
[[Category: Multidomain protein]]
[[Category: Multidomain protein]]
[[Category: Retaining mechanism]]
[[Category: Retaining mechanism]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 04:39:02 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 16:49:36 2008''

Revision as of 13:49, 27 July 2008

Image:2g3m.png

Template:STRUCTURE 2g3m

Crystal structure of the Sulfolobus solfataricus alpha-glucosidase MalA

Template:ABSTRACT PUBMED 16580018

About this Structure

2G3M is a Single protein structure of sequence from Sulfolobus solfataricus. Full crystallographic information is available from OCA.

Reference

Structure of the Sulfolobus solfataricus alpha-glucosidase: implications for domain conservation and substrate recognition in GH31., Ernst HA, Lo Leggio L, Willemoes M, Leonard G, Blum P, Larsen S, J Mol Biol. 2006 May 12;358(4):1106-24. Epub 2006 Mar 13. PMID:16580018

Page seeded by OCA on Sun Jul 27 16:49:36 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2g3m"
Personal tools