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Template:STRUCTURE 1rfm
From Proteopedia
(Difference between revisions)
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|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1rfm, resolution 2.50Å (<scene name='initialview01'>initial scene</scene>)}}} | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1rfm, resolution 2.50Å (<scene name='initialview01'>initial scene</scene>)}}} | ||
|SITE= <scene name='pdbsite=AC1:Nad+Binding+Site+For+Residue+A+4001'>AC1</scene>, <scene name='pdbsite=AC2:Nad+Binding+Site+For+Residue+B+4002'>AC2</scene>, <scene name='pdbsite=AC3:Nad+Binding+Site+For+Residue+C+4003'>AC3</scene>, <scene name='pdbsite=AC4:Nad+Binding+Site+For+Residue+D+4004'>AC4</scene>, <scene name='pdbsite=AC5:Nad+Binding+Site+For+Residue+E+4005'>AC5</scene>, <scene name='pdbsite=AC6:Nad+Binding+Site+For+Residue+F+4006'>AC6</scene>, <scene name='pdbsite=AC7:Nad+Binding+Site+For+Residue+G+4007'>AC7</scene> and <scene name='pdbsite=AC8:Nad+Binding+Site+For+Residue+H+4008'>AC8</scene> | |SITE= <scene name='pdbsite=AC1:Nad+Binding+Site+For+Residue+A+4001'>AC1</scene>, <scene name='pdbsite=AC2:Nad+Binding+Site+For+Residue+B+4002'>AC2</scene>, <scene name='pdbsite=AC3:Nad+Binding+Site+For+Residue+C+4003'>AC3</scene>, <scene name='pdbsite=AC4:Nad+Binding+Site+For+Residue+D+4004'>AC4</scene>, <scene name='pdbsite=AC5:Nad+Binding+Site+For+Residue+E+4005'>AC5</scene>, <scene name='pdbsite=AC6:Nad+Binding+Site+For+Residue+F+4006'>AC6</scene>, <scene name='pdbsite=AC7:Nad+Binding+Site+For+Residue+G+4007'>AC7</scene> and <scene name='pdbsite=AC8:Nad+Binding+Site+For+Residue+H+4008'>AC8</scene> | ||
| - | |LIGAND= | + | |LIGAND= <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene> |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/(R)-2-hydroxyacid_dehydrogenase (R)-2-hydroxyacid dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.272 1.1.1.272] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/(R)-2-hydroxyacid_dehydrogenase (R)-2-hydroxyacid dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.272 1.1.1.272] </span> | ||
|GENE= COMC, MDH, MJ1425 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 Methanocaldococcus jannaschii]) | |GENE= COMC, MDH, MJ1425 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 Methanocaldococcus jannaschii]) | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02615 Ldh_2]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02615 Ldh_2]</span> | ||
| - | | | + | |NONSTDRES=<scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene> |
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rfm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rfm OCA], [http://www.ebi.ac.uk/pdbsum/1rfm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rfm RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rfm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rfm OCA], [http://www.ebi.ac.uk/pdbsum/1rfm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rfm RCSB]</span> | ||
|FUNCTION={{GO|id=GO:0050578 | text = (R)-2-hydroxyacid dehydrogenase activity}}{{GO|id=GO:0016491 | text = oxidoreductase activity}} | |FUNCTION={{GO|id=GO:0050578 | text = (R)-2-hydroxyacid dehydrogenase activity}}{{GO|id=GO:0016491 | text = oxidoreductase activity}} | ||
|PROCESS={{GO|id=GO:0019295 | text = coenzyme M biosynthetic process}}{{GO|id=GO:0008152 | text = metabolic process}} | |PROCESS={{GO|id=GO:0019295 | text = coenzyme M biosynthetic process}}{{GO|id=GO:0008152 | text = metabolic process}} | ||
|COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | |COMPONENT={{GO|id=GO:0005737 | text = cytoplasm}} | ||
| - | |SARESOURCES=<span class='plainlinks' | + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003767 Ipr003767]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02615 PF02615]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=97385 d1rfma_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=97386 d1rfmb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=97387 d1rfmc_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=97388 d1rfmd_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=97389 d1rfme_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=97390 d1rfmf_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=97391 d1rfmg_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=97392 d1rfmh_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q58820 Q58820]</span> |
}} | }} | ||
