This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 2zhr
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|2zhr, resolution 2.50Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2zhr]], resolution 2.50Å (<scene name='initialview01'>default scene</scene>)}}} |
|SITE= <scene name='pdbsite=AC1:Lol+Binding+Site+For+Residue+C+4'>AC1</scene>, <scene name='pdbsite=AC2:Alq+Binding+Site+For+Residue+C+5'>AC2</scene>, <scene name='pdbsite=AC3:Lol+Binding+Site+For+Residue+D+4'>AC3</scene> and <scene name='pdbsite=AC4:Alq+Binding+Site+For+Residue+D+5'>AC4</scene> | |SITE= <scene name='pdbsite=AC1:Lol+Binding+Site+For+Residue+C+4'>AC1</scene>, <scene name='pdbsite=AC2:Alq+Binding+Site+For+Residue+C+5'>AC2</scene>, <scene name='pdbsite=AC3:Lol+Binding+Site+For+Residue+D+4'>AC3</scene> and <scene name='pdbsite=AC4:Alq+Binding+Site+For+Residue+D+5'>AC4</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Memapsin_2 Memapsin 2], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.46 3.4.23.46] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Memapsin_2 Memapsin 2], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.23.46 3.4.23.46] </span> | ||
| Line 9: | Line 9: | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zhr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhr OCA], [http://www.ebi.ac.uk/pdbsum/2zhr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2zhr RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2zhr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zhr OCA], [http://www.ebi.ac.uk/pdbsum/2zhr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2zhr RCSB]</span> | ||
|SARESOURCES=<span class='plainlinks'>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P56817 P56817]</span> | |SARESOURCES=<span class='plainlinks'>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P56817 P56817]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2zhr_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_2zhr_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_2zhr_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>D [x]</text> | ||
| + | <name>jmb_2zhr_D</name> | ||
| + | <title>toggle chain D</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 09:51, 16 February 2009
| |||||||||
| 2zhr, resolution 2.50Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Sites: | , , and | ||||||||
| Non-Standard Residues: | , | ||||||||
| Gene: | BACE1 (Homo sapiens) | ||||||||
| Activity: | Memapsin 2, with EC number 3.4.23.46 | ||||||||
| Domains: | Asp | ||||||||
| Related: | 2zhs, 2zht, 2zhu, 2zhv | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
