Template:STRUCTURE 1bm0

From Proteopedia

(Difference between revisions)

Revision as of 22:08, 17 February 2009

1bm0, resolution 2.50Å ()

Domains:

Structural annotation:
Resources:	CATH : 1Bm0A03, 1Bm0A06, 1Bm0A05, 1Bm0A02, 1Bm0A04, 1Bm0A01, 1Bm0B01, 1Bm0B02, 1Bm0B04, 1Bm0B05, 1Bm0B06, 1Bm0B03 InterPro : Ipr000264, Ipr001703, Ipr014760 Pfam : PF00273 SCOP : d1bm0a3, d1bm0a2, d1bm0a1, d1bm0b2, d1bm0b3, d1bm0b1 UniProt : P02768

Functional annotation:
Cellular component:	extracellular region extracellular space protein complex
Biological process:	hemolysis by symbiont of host red blood cells maintenance of mitochondrion localization negative regulation of apoptosis cellular response to starvation negative regulation of non-apoptotic programmed cell death transport
Molecular function:	DNA binding antioxidant activity protein binding copper ion binding toxin binding pyridoxal phosphate binding drug binding oxygen binding metal ion binding lipid binding fatty acid binding

Evolutionary conservation:

Toggle Conservation Colors:	Rows = identical sequences:
Further Information:	Caveats, Explanation, Complete Results at ConSurfDB

Resources:

FirstGlance, OCA, PDBsum, RCSB

Coordinates:

save as pdb, mmCIF, xml

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/Template:STRUCTURE_1bm0"

@@ Line 1: / Line 1: @@
-{{StructureD
+{{Structure
-|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1bm0, resolution 2.50&Aring; (<scene name='initialview01'>initial scene</scene>)}}}
+|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1bm0]], resolution 2.50&Aring; (<scene name='initialview01'>default scene</scene>)}}}
 |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00015 ALBUMIN]</span>
 |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1bm0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bm0 OCA], [http://www.ebi.ac.uk/pdbsum/1bm0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1bm0 RCSB]</span>
@@ Line 7: / Line 7: @@
 |COMPONENT={{GO|id=GO:0005576 | text = extracellular region}}{{GO|id=GO:0005615 | text = extracellular space}}{{GO|id=GO:0043234 | text = protein complex}}
 |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0A03 1Bm0A03], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0A06 1Bm0A06], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0A05 1Bm0A05], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0A02 1Bm0A02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0A04 1Bm0A04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0A01 1Bm0A01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0B01 1Bm0B01], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0B02 1Bm0B02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0B04 1Bm0B04], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0B05 1Bm0B05], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0B06 1Bm0B06], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1bm0B03 1Bm0B03]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000264 Ipr000264], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001703 Ipr001703], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014760 Ipr014760]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00273 PF00273]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19350 d1bm0a3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19349 d1bm0a2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19348 d1bm0a1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19352 d1bm0b2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19353 d1bm0b3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=19351 d1bm0b1]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P02768 P02768]</span>
+|CONSURF={{!}}-
+{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
+{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
+{{!}} '''Toggle Conservation Colors:'''
+{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
+Rows = identical sequences:
+<jmol>
+<jmolButton>
+<script></script>
+<text>A [x]</text>
+<name>jmb_1bm0_A</name>
+<title>toggle chain A</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
+<jmol>
+<jmolButton>
+<script></script>
+<text>B [x]</text>
+<name>jmb_1bm0_B</name>
+<title>toggle chain B</title>
+<jsscript>ConsurfChainButton(elementClicked)</jsscript>
+<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
+</jmolButton>
+</jmol>
 }}

Template:STRUCTURE 1bm0

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Revision as of 22:08, 17 February 2009

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