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Template:STRUCTURE 1ab4
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1ab4, resolution 2.80Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1ab4]], resolution 2.80Å (<scene name='initialview01'>default scene</scene>)}}} |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA_topoisomerase_(ATP-hydrolyzing) DNA topoisomerase (ATP-hydrolyzing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.99.1.3 5.99.1.3] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/DNA_topoisomerase_(ATP-hydrolyzing) DNA topoisomerase (ATP-hydrolyzing)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.99.1.3 5.99.1.3] </span> | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00521 DNA_topoisoIV], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00187 TOP4c]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00521 DNA_topoisoIV], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00187 TOP4c]</span> | ||
| Line 8: | Line 8: | ||
|COMPONENT={{GO|id=GO:0005624 | text = membrane fraction}}{{GO|id=GO:0005737 | text = cytoplasm}}{{GO|id=GO:0005694 | text = chromosome}} | |COMPONENT={{GO|id=GO:0005624 | text = membrane fraction}}{{GO|id=GO:0005737 | text = cytoplasm}}{{GO|id=GO:0005694 | text = chromosome}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ab4001 1Ab4001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ab4002 1Ab4002], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ab4003 1Ab4003]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002205 Ipr002205], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005743 Ipr005743], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013758 Ipr013758], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013757 Ipr013757], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013760 Ipr013760], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006691 Ipr006691]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00521 PF00521]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=43251 d1ab4__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0AES4 P0AES4]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ab4001 1Ab4001], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ab4002 1Ab4002], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1ab4003 1Ab4003]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002205 Ipr002205], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005743 Ipr005743], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013758 Ipr013758], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013757 Ipr013757], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013760 Ipr013760], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006691 Ipr006691]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00521 PF00521]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=43251 d1ab4__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P0AES4 P0AES4]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1ab4_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 21:53, 16 February 2009
| |||||||||
| 1ab4, resolution 2.80Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Activity: | DNA topoisomerase (ATP-hydrolyzing), with EC number 5.99.1.3 | ||||||||
| Domains: | DNA_topoisoIV, TOP4c | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
