Template:STRUCTURE 1jch
From Proteopedia
(Difference between revisions)
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- | {{ | + | {{Structure |
- | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1jch, resolution 3.02Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1jch]], resolution 3.02Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene> | |LIGAND= <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene> | ||
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09000 Cytotoxic], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03515 Cloacin], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03513 Cloacin_immun]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09000 Cytotoxic], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03515 Cloacin], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03513 Cloacin_immun]</span> | ||
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|COMPONENT={{GO|id=GO:0005727 | text = extrachromosomal circular DNA}} | |COMPONENT={{GO|id=GO:0005727 | text = extrachromosomal circular DNA}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1jchB00 1Jchb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1jchD00 1Jchd00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009105 Ipr009105], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003058 Ipr003058], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003063 Ipr003063]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03515 PF03515], [http://pfam.sanger.ac.uk/family?acc=PF09000 PF09000], [http://pfam.sanger.ac.uk/family?acc=PF03513 PF03513]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66493 d1jcha3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66492 d1jcha2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66491 d1jcha1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66494 d1jchb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66496 d1jchc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66497 d1jchc3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66495 d1jchc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66498 d1jchd_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00646 P00646], [http://ca.expasy.org/cgi-bin/niceprot.pl?P02984 P02984]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1jchB00 1Jchb00], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1jchD00 1Jchd00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009105 Ipr009105], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003058 Ipr003058], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003063 Ipr003063]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF03515 PF03515], [http://pfam.sanger.ac.uk/family?acc=PF09000 PF09000], [http://pfam.sanger.ac.uk/family?acc=PF03513 PF03513]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66493 d1jcha3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66492 d1jcha2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66491 d1jcha1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66494 d1jchb_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66496 d1jchc2], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66497 d1jchc3], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66495 d1jchc1], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=66498 d1jchd_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00646 P00646], [http://ca.expasy.org/cgi-bin/niceprot.pl?P02984 P02984]</span> | ||
+ | |CONSURF={{!}}- | ||
+ | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
+ | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
+ | {{!}} '''Toggle Conservation Colors:''' | ||
+ | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
+ | Rows = identical sequences: | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>A [x]</text> | ||
+ | <name>jmb_1jch_A</name> | ||
+ | <title>toggle chain A</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>C [x]</text> | ||
+ | <name>jmb_1jch_C</name> | ||
+ | <title>toggle chain C</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>B [x]</text> | ||
+ | <name>jmb_1jch_B</name> | ||
+ | <title>toggle chain B</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | <jmol> | ||
+ | <jmolButton> | ||
+ | <script></script> | ||
+ | <text>D [x]</text> | ||
+ | <name>jmb_1jch_D</name> | ||
+ | <title>toggle chain D</title> | ||
+ | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
+ | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
+ | </jmolButton> | ||
+ | </jmol> | ||
+ | |||
}} | }} |
Revision as of 06:29, 18 February 2009
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1jch, resolution 3.02Å () | |||||||||
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Ligands: | , | ||||||||
Domains: | Cytotoxic, Cloacin, Cloacin_immun | ||||||||
Related: | 3eip, 1e44 | ||||||||
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Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
Coordinates: | save as pdb, mmCIF, xml |