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Template:STRUCTURE 1maf
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1maf, resolution 2.60Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1maf]], resolution 2.60Å (<scene name='initialview01'>default scene</scene>)}}} |
|LIGAND= <scene name='pdbligand=HDZ:NITROGEN+MOLECULE'>HDZ</scene>, <scene name='pdbligand=QTR:OXYGEN+OF+QUINONE'>QTR</scene> | |LIGAND= <scene name='pdbligand=HDZ:NITROGEN+MOLECULE'>HDZ</scene>, <scene name='pdbligand=QTR:OXYGEN+OF+QUINONE'>QTR</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Amine_dehydrogenase Amine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.99.3 1.4.99.3] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Amine_dehydrogenase Amine dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.99.3 1.4.99.3] </span> | ||
| Line 9: | Line 9: | ||
|COMPONENT={{GO|id=GO:0042597 | text = periplasmic space}}{{GO|id=GO:0030288 | text = outer membrane-bounded periplasmic space}} | |COMPONENT={{GO|id=GO:0042597 | text = periplasmic space}}{{GO|id=GO:0030288 | text = outer membrane-bounded periplasmic space}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1mafL00 1Mafl00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009451 Ipr009451], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011044 Ipr011044], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013476 Ipr013476], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013504 Ipr013504], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006311 Ipr006311], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004229 Ipr004229]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF06433 PF06433], [http://pfam.sanger.ac.uk/family?acc=PF02975 PF02975]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=27640 d1mafh_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44888 d1mafl_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P23006 P23006], [http://ca.expasy.org/cgi-bin/niceprot.pl?P22641 P22641]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1mafL00 1Mafl00]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009451 Ipr009451], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011044 Ipr011044], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013476 Ipr013476], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013504 Ipr013504], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006311 Ipr006311], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004229 Ipr004229]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF06433 PF06433], [http://pfam.sanger.ac.uk/family?acc=PF02975 PF02975]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=27640 d1mafh_], [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=44888 d1mafl_]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P23006 P23006], [http://ca.expasy.org/cgi-bin/niceprot.pl?P22641 P22641]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1maf_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>C [x]</text> | ||
| + | <name>jmb_1maf_C</name> | ||
| + | <title>toggle chain C</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 14:57, 16 February 2009
| |||||||||
| 1maf, resolution 2.60Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Ligands: | , | ||||||||
| Activity: | Amine dehydrogenase, with EC number 1.4.99.3 | ||||||||
| Domains: | Me-amine-dh_L, Me-amine-dh_H | ||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
