This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Template:STRUCTURE 1mb1
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | {{ | + | {{Structure |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|1mb1, resolution 2.10Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1mb1]], resolution 2.10Å (<scene name='initialview01'>default scene</scene>)}}} |
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02292 APSES]</span> | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02292 APSES]</span> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1mb1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mb1 OCA], [http://www.ebi.ac.uk/pdbsum/1mb1 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1mb1 RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1mb1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1mb1 OCA], [http://www.ebi.ac.uk/pdbsum/1mb1 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1mb1 RCSB]</span> | ||
| Line 6: | Line 6: | ||
|PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}} | |PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}} | ||
|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1mb1000 1Mb1000]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003163 Ipr003163]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02292 PF02292]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=38529 d1mb1__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q6Q7H1 Q6Q7H1]</span> | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1mb1000 1Mb1000]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003163 Ipr003163]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF02292 PF02292]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=38529 d1mb1__]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q6Q7H1 Q6Q7H1]</span> | ||
| + | |CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_1mb1_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Revision as of 06:30, 18 February 2009
| |||||||||
| 1mb1, resolution 2.10Å () | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Domains: | APSES | ||||||||
| |||||||||
| |||||||||
| |||||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||

