1j97

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(New page: 200px<br /><applet load="1j97" size="450" color="white" frame="true" align="right" spinBox="true" caption="1j97, resolution 1.5&Aring;" /> '''Phospho-Aspartyl Inte...)
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'''Phospho-Aspartyl Intermediate Analogue of Phosphoserine phosphatase'''<br />
'''Phospho-Aspartyl Intermediate Analogue of Phosphoserine phosphatase'''<br />
==Overview==
==Overview==
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Protein phosphoaspartate bonds play a variety of roles. In response, regulator proteins of two-component signal transduction systems, phosphorylation of an aspartate residue is coupled to a change from an, inactive to an active conformation. In phosphatases and mutases of the, haloacid dehalogenase (HAD) superfamily, phosphoaspartate serves as an, intermediate in phosphotransfer reactions, and in P-type ATPases, also, members of the HAD family, it serves in the conversion of chemical energy, to ion gradients. In each case, lability of the phosphoaspartate linkage, has hampered a detailed study of the phosphorylated form. For response, regulators, this difficulty was recently overcome with a phosphate analog, BeF(3)(-), which yields persistent complexes with the active site, aspartate of their receiver domains. We now extend the application of this, analog to a HAD superfamily member by solving at 1.5-A resolution the, x-ray crystal structure of the complex of BeF(3)(-) with phosphoserine, phosphatase (PSP) from Methanococcus jannaschii. The structure is, comparable to that of a phosphoenzyme intermediate: BeF(3)(-) is bound to, Asp-11 with the tetrahedral geometry of a phosphoryl group, is coordinated, to Mg(2+), and is bound to residues surrounding the active site that are, conserved in the HAD superfamily. Comparison of the active sites of, BeF(3)(-) x PSP and BeF(3)(-) x CeY, a receiver domain/response regulator, reveals striking similarities that provide insights into the function not, only of PSP but also of P-type ATPases. Our results indicate that use of, BeF(3)(-) for structural studies of proteins that form phosphoaspartate, linkages will extend well beyond response regulators.
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Protein phosphoaspartate bonds play a variety of roles. In response regulator proteins of two-component signal transduction systems, phosphorylation of an aspartate residue is coupled to a change from an inactive to an active conformation. In phosphatases and mutases of the haloacid dehalogenase (HAD) superfamily, phosphoaspartate serves as an intermediate in phosphotransfer reactions, and in P-type ATPases, also members of the HAD family, it serves in the conversion of chemical energy to ion gradients. In each case, lability of the phosphoaspartate linkage has hampered a detailed study of the phosphorylated form. For response regulators, this difficulty was recently overcome with a phosphate analog, BeF(3)(-), which yields persistent complexes with the active site aspartate of their receiver domains. We now extend the application of this analog to a HAD superfamily member by solving at 1.5-A resolution the x-ray crystal structure of the complex of BeF(3)(-) with phosphoserine phosphatase (PSP) from Methanococcus jannaschii. The structure is comparable to that of a phosphoenzyme intermediate: BeF(3)(-) is bound to Asp-11 with the tetrahedral geometry of a phosphoryl group, is coordinated to Mg(2+), and is bound to residues surrounding the active site that are conserved in the HAD superfamily. Comparison of the active sites of BeF(3)(-) x PSP and BeF(3)(-) x CeY, a receiver domain/response regulator, reveals striking similarities that provide insights into the function not only of PSP but also of P-type ATPases. Our results indicate that use of BeF(3)(-) for structural studies of proteins that form phosphoaspartate linkages will extend well beyond response regulators.
==About this Structure==
==About this Structure==
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1J97 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii] with MG and PO4 as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Phosphoserine_phosphatase Phosphoserine phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.3 3.1.3.3] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1J97 OCA].
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1J97 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii] with <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Phosphoserine_phosphatase Phosphoserine phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.3 3.1.3.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J97 OCA].
==Reference==
==Reference==
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[[Category: Phosphoserine phosphatase]]
[[Category: Phosphoserine phosphatase]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: BSGC, Berkeley.Structural.Genomics.Center.]]
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[[Category: BSGC, Berkeley Structural Genomics Center.]]
[[Category: Cho, H.]]
[[Category: Cho, H.]]
[[Category: Damo, S.]]
[[Category: Damo, S.]]
[[Category: Kim, R.]]
[[Category: Kim, R.]]
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[[Category: Kim, S.H.]]
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[[Category: Kim, S H.]]
[[Category: Kustu, S.]]
[[Category: Kustu, S.]]
[[Category: Wang, W.]]
[[Category: Wang, W.]]
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[[Category: structural genomics]]
[[Category: structural genomics]]
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Revision as of 11:20, 21 February 2008


1j97, resolution 1.5Å

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Phospho-Aspartyl Intermediate Analogue of Phosphoserine phosphatase

Overview

Protein phosphoaspartate bonds play a variety of roles. In response regulator proteins of two-component signal transduction systems, phosphorylation of an aspartate residue is coupled to a change from an inactive to an active conformation. In phosphatases and mutases of the haloacid dehalogenase (HAD) superfamily, phosphoaspartate serves as an intermediate in phosphotransfer reactions, and in P-type ATPases, also members of the HAD family, it serves in the conversion of chemical energy to ion gradients. In each case, lability of the phosphoaspartate linkage has hampered a detailed study of the phosphorylated form. For response regulators, this difficulty was recently overcome with a phosphate analog, BeF(3)(-), which yields persistent complexes with the active site aspartate of their receiver domains. We now extend the application of this analog to a HAD superfamily member by solving at 1.5-A resolution the x-ray crystal structure of the complex of BeF(3)(-) with phosphoserine phosphatase (PSP) from Methanococcus jannaschii. The structure is comparable to that of a phosphoenzyme intermediate: BeF(3)(-) is bound to Asp-11 with the tetrahedral geometry of a phosphoryl group, is coordinated to Mg(2+), and is bound to residues surrounding the active site that are conserved in the HAD superfamily. Comparison of the active sites of BeF(3)(-) x PSP and BeF(3)(-) x CeY, a receiver domain/response regulator, reveals striking similarities that provide insights into the function not only of PSP but also of P-type ATPases. Our results indicate that use of BeF(3)(-) for structural studies of proteins that form phosphoaspartate linkages will extend well beyond response regulators.

About this Structure

1J97 is a Single protein structure of sequence from Methanocaldococcus jannaschii with and as ligands. Active as Phosphoserine phosphatase, with EC number 3.1.3.3 Full crystallographic information is available from OCA.

Reference

BeF(3)(-) acts as a phosphate analog in proteins phosphorylated on aspartate: structure of a BeF(3)(-) complex with phosphoserine phosphatase., Cho H, Wang W, Kim R, Yokota H, Damo S, Kim SH, Wemmer D, Kustu S, Yan D, Proc Natl Acad Sci U S A. 2001 Jul 17;98(15):8525-30. Epub 2001 Jul 3. PMID:11438683

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