We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.
Template:STRUCTURE 3ddq
From Proteopedia
(Difference between revisions)
m (Protected "Template:STRUCTURE 3ddq" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | {{ | + | {{StructureD |
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|3ddq, resolution 1.80Å (<scene name='initialview01'> | + | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|3ddq, resolution 1.80Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | |SITE= <scene name='pdbsite=AC1: | + | |SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+Rrc+A+299'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Rrc+C+299'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Sgm+B+1'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+Sgm+D+1'>AC4</scene> and <scene name='pdbsite=AC5:Binding+Site+For+Residue+Sgm+B+440'>AC5</scene> |
|LIGAND= <scene name='pdbligand=RRC:R-ROSCOVITINE'>RRC</scene>, <scene name='pdbligand=SGM:MONOTHIOGLYCEROL'>SGM</scene> | |LIGAND= <scene name='pdbligand=RRC:R-ROSCOVITINE'>RRC</scene>, <scene name='pdbligand=SGM:MONOTHIOGLYCEROL'>SGM</scene> | ||
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclin-dependent_kinase Cyclin-dependent kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.22 2.7.11.22] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Cyclin-dependent_kinase Cyclin-dependent kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.22 2.7.11.22] </span> | ||
|GENE= CDK2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), CCNA2, CCNA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 Bos taurus]) | |GENE= CDK2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens]), CCNA2, CCNA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9913 Bos taurus]) | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00180 S_TKc], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00220 S_TKc]</span> | ||
|RELATEDENTRY=[[3ddp|3ddp]] | |RELATEDENTRY=[[3ddp|3ddp]] | ||
|NONSTDRES=<scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene> | |NONSTDRES=<scene name='pdbligand=TPO:PHOSPHOTHREONINE'>TPO</scene> | ||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ddq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ddq OCA], [http://www.ebi.ac.uk/pdbsum/3ddq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3ddq RCSB]</span> | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ddq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ddq OCA], [http://www.ebi.ac.uk/pdbsum/3ddq PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3ddq RCSB]</span> | ||
| + | |FUNCTION={{GO|id=GO:0016301 | text = kinase activity}}{{GO|id=GO:0035173 | text = histone kinase activity}}{{GO|id=GO:0005515 | text = protein binding}}{{GO|id=GO:0004672 | text = protein kinase activity}}{{GO|id=GO:0042802 | text = identical protein binding}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0016740 | text = transferase activity}}{{GO|id=GO:0000166 | text = nucleotide binding}}{{GO|id=GO:0004674 | text = protein serine/threonine kinase activity}}{{GO|id=GO:0004693 | text = cyclin-dependent protein kinase activity}} | ||
| + | |PROCESS={{GO|id=GO:0000086 | text = G2/M transition of mitotic cell cycle}}{{GO|id=GO:0007089 | text = traversing start control point of mitotic cell cycle}}{{GO|id=GO:0008284 | text = positive regulation of cell proliferation}}{{GO|id=GO:0007067 | text = mitosis}}{{GO|id=GO:0006275 | text = regulation of DNA replication}}{{GO|id=GO:0007049 | text = cell cycle}}{{GO|id=GO:0006468 | text = protein amino acid phosphorylation}}{{GO|id=GO:0006260 | text = DNA replication}}{{GO|id=GO:0051301 | text = cell division}}{{GO|id=GO:0045941 | text = positive regulation of transcription}} | ||
| + | |COMPONENT={{GO|id=GO:0000307 | text = cyclin-dependent protein kinase holoenzyme complex}}{{GO|id=GO:0005829 | text = cytosol}}{{GO|id=GO:0005737 | text = cytoplasm}}{{GO|id=GO:0005654 | text = nucleoplasm}}{{GO|id=GO:0005634 | text = nucleus}}{{GO|id=GO:0001939 | text = female pronucleus}}{{GO|id=GO:0001940 | text = male pronucleus}} | ||
| + | |SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000719 Ipr000719], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002290 Ipr002290], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR008271 Ipr008271], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011009 Ipr011009], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017441 Ipr017441], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017442 Ipr017442], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR004367 Ipr004367], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006670 Ipr006670], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006671 Ipr006671], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011028 Ipr011028], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013763 Ipr013763], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR014400 Ipr014400], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR015453 Ipr015453]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00069 PF00069], [http://pfam.sanger.ac.uk/family?acc=PF00134 PF00134], [http://pfam.sanger.ac.uk/family?acc=PF02984 PF02984]</span> | ||
}} | }} | ||
